Managers 16Dec09

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Participants:

Agenda: Jen

Minutes: David

Action items from previous calls

  • David, Tanya, Jane: Compose wiki documentation for ontology editors, with step-by-step instructions on making cross-products - in progress
  • Jen: Draft wiki page to summarize motivation for MF-BP links - in progress
  • Managers: Comment on draft proposal that Suzi will circulate (content meetings, RefGen annotations, etc.) - not sent
  • Pascale: Confirm date of Geneva annotation camp - 14th-17th June at SIB - sent to GO-Top and only Judy responded. GO-Top to confirm.
  • Midori, Jane, David, Tanya, Chris: Midori to resend draft (DONE), others to comment - sent - some comments received. In progress.
  • Chris filter IEAs from GAF inference. do we need more detailed evidence codes - e.g. IC-derived-from-ISS - in progress
  • Chris report on aligning Reactome and GO - in progress
  • Emily: We can use this text http://wiki.geneontology.org/index.php/GAF_2.0 to make documentation of GAF 2.0 for the website. Perhaps Emily and Amelia would like to work together on that.
  • Emily: Send a mail to GO-friends to advertise GAF 2.0 and to show the docs.


Discussion items

  • CHEBI XPs. The classification of some chemical entities such as "carbohydrate" in CHEBI is radically from GO (for example, in CHEBI, nucleotide is_a carbohydrate). Should we just adopt their classification wholesale? This would radically reorganize GO in places (Chris)
  • UniProtKB IDs. (Chris)

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