Managers 16Dec09
Participants:
Agenda: Jen
Minutes: David
Action items from previous calls
- David, Tanya, Jane: Compose wiki documentation for ontology editors, with step-by-step instructions on making cross-products - in progress
- Jen: Draft wiki page to summarize motivation for MF-BP links - in progress
- Managers: Comment on draft proposal that Suzi will circulate (content meetings, RefGen annotations, etc.) - not sent
- Pascale: Confirm date of Geneva annotation camp - 14th-17th June at SIB - sent to GO-Top and only Judy responded. GO-Top to confirm.
- Midori, Jane, David, Tanya, Chris: Midori to resend draft (DONE), others to comment - sent - some comments received. In progress.
- Chris filter IEAs from GAF inference. do we need more detailed evidence codes - e.g. IC-derived-from-ISS - in progress
- Chris report on aligning Reactome and GO - in progress
- Emily: We can use this text http://wiki.geneontology.org/index.php/GAF_2.0 to make documentation of GAF 2.0 for the website. Perhaps Emily and Amelia would like to work together on that.
- Emily: Send a mail to GO-friends to advertise GAF 2.0 and to show the docs.
Discussion items
- CHEBI XPs. The classification of some chemical entities such as "carbohydrate" in CHEBI is radically from GO (for example, in CHEBI, nucleotide is_a carbohydrate). Should we just adopt their classification wholesale? This would radically reorganize GO in places (Chris)
- UniProtKB IDs. (Chris)
- Extended GO - we don't advertise this well. There's not even any documentation to say what's in this file and what makes it better than the existing file. What can we do to make this better? (Jane)