OEWG 20091001: Difference between revisions

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(Created page with 'OBO-Edit Working Group, Thursday October 1st, 2009 8.30 a.m. PDT <br> Conference call details:<br> US: 1-888-727-6732<br> Outside US: 1-719-867-3417<br> pin: 601425<br> Agenda/…')
 
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[[Category:OBO-Edit working group]]
OBO-Edit Working Group, Thursday October 1st, 2009 8.30 a.m. PDT <br>
OBO-Edit Working Group, Thursday October 1st, 2009 8.30 a.m. PDT <br>


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pin: 601425<br>
pin: 601425<br>


Agenda/Chair: <br>
Agenda/Chair: Amina<br>
Minutes: <br>
Minutes: Amina<br>
Attendees:
Attendees: Jen, Midori, DavidOS, Harold, Amina


==Action items carried over==
==Action items carried over==
None


==Discussion items==
* OBO-Edit at the GO Consortium meeting last week
** Term generation plugin demo was useful in demonstrating working and was very well received by the community
Jen: Does not show the source
Midori: The tool goes and finds everything
Jen: most of the things we're searching i know the source
Harold: boilerplate definition..standard way of saying things.. you have that boilerplate in front of you
standard support
Amina discusses semantic parser manager working and improvements
* Midoris xps presentation at the GO meeting
** xps editor demo
* Interoperability support agenda item at GO meeting
** Chris said DONE
DavidOS: obo files load ok in protege<br>
If you load owl files it mangles the ids etc<br>
I dont know to what extent interoperability of OBO-Edit with OWL is required<br>
The one built in to protege is not bad but messes up OBO Ids<br>
Theres also a weird one built at stanford which is buried somewhere<br>
The decisions and requirements for interoperability have to be clearly laid out<br>
** Short discussion about the GO grant renewal and speculation about tool development requirements
DavidOS: Ideas about OBO-Edit3 and how it should work with the owl world too, plugin for protege etc<br>
* Harold: application crashes when I first load it and then its fine the rest of the day<br>
DavidOS: 2.1 is more crash prone than 2.0<br>
DOS: switching between reasoners is really bad<br>
Midori - using one reasoner and then switching it off<br>
- off after done reasoning<br>
Harold: im going to try doing it now<br>


==Discussion items==
* 2.1 Release pending documentation and verification manager fixes.




==== Bugs ====
==== Bugs ====
* [https://sourceforge.net/tracker/?func=detail&aid=2836927&group_id=36855&atid=418257 disjoint links] <font color="blue"> ? </font>
Jen: Wonders if this is a side effect of the way some components such as the Tree Viewer hide disjoint links in the display. <br>
A quick test of the filters in the OTE shows disjoint links fine.<br>
Amina: will investigate


==== Features ====
==== Features ====




==== Consortium meeting ====
==Action Items==
* Semantic parser manager documentation, working and future plan
* Reasoner bugs - cancel and switching between terms causes crashes
* Investigate crashes looking at Harold's log file
 
 


==Action Items==


==Links==
==Links==
[[OBO-Edit_Working_Group_Meeting_Agenda_and_Minutes|Back to OEWG Meeting agenda and minutes List]]
[[OBO-Edit_Working_Group_Meeting_Agenda_and_Minutes|Back to OEWG Meeting agenda and minutes List]]

Latest revision as of 16:58, 30 June 2014

OBO-Edit Working Group, Thursday October 1st, 2009 8.30 a.m. PDT

Conference call details:
US: 1-888-727-6732
Outside US: 1-719-867-3417
pin: 601425

Agenda/Chair: Amina
Minutes: Amina
Attendees: Jen, Midori, DavidOS, Harold, Amina

Action items carried over

None

Discussion items

  • OBO-Edit at the GO Consortium meeting last week
    • Term generation plugin demo was useful in demonstrating working and was very well received by the community

Jen: Does not show the source Midori: The tool goes and finds everything Jen: most of the things we're searching i know the source Harold: boilerplate definition..standard way of saying things.. you have that boilerplate in front of you standard support

Amina discusses semantic parser manager working and improvements

  • Midoris xps presentation at the GO meeting
    • xps editor demo
  • Interoperability support agenda item at GO meeting
    • Chris said DONE

DavidOS: obo files load ok in protege
If you load owl files it mangles the ids etc
I dont know to what extent interoperability of OBO-Edit with OWL is required
The one built in to protege is not bad but messes up OBO Ids
Theres also a weird one built at stanford which is buried somewhere
The decisions and requirements for interoperability have to be clearly laid out

    • Short discussion about the GO grant renewal and speculation about tool development requirements

DavidOS: Ideas about OBO-Edit3 and how it should work with the owl world too, plugin for protege etc


  • Harold: application crashes when I first load it and then its fine the rest of the day

DavidOS: 2.1 is more crash prone than 2.0

DOS: switching between reasoners is really bad
Midori - using one reasoner and then switching it off
- off after done reasoning
Harold: im going to try doing it now

  • 2.1 Release pending documentation and verification manager fixes.


Bugs

Jen: Wonders if this is a side effect of the way some components such as the Tree Viewer hide disjoint links in the display.
A quick test of the filters in the OTE shows disjoint links fine.
Amina: will investigate


Features

Action Items

  • Semantic parser manager documentation, working and future plan
  • Reasoner bugs - cancel and switching between terms causes crashes
  • Investigate crashes looking at Harold's log file



Links

Back to OEWG Meeting agenda and minutes List