OEWG 20120501: Difference between revisions

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(Created page with "== OBO-Edit Working Group Meeting: Tuesday, April 17, 2012, 8:30am PDT == __NOTOC__ Conference call numbers:<br /> US: 1 866 953 9688<br /> UK: 0808 238 6001<br /> PIN: 801561<br...")
 
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*** Was this even tested??
*** Was this even tested??
** Undo wouldn't undo even one deletion done in Remove Redundant Links
** Undo wouldn't undo even one deletion done in Remove Redundant Links
*** The way links were being removed (by creating multiple(!) TermMacroHistoryItems) the removal couldn't be undone. If you deleted even a single link, Undo wouldn't restore it.
*** The way links were being removed (by creating multiple(!) TermMacroHistoryItems), the removal couldn't be undone. If you deleted even a single link, Undo wouldn't restore it.
*** I have improved this behavior--you can now undo single deletions. However, if you delete multiple links at a time, Undo only successfully undoes the last one. I'm not sure why.
*** I have improved this behavior--you can now undo single deletions. However, if you delete multiple links at a time, Undo only successfully undoes the last one. I'm not sure why.
**** Tracker item for remaining issue: [http://sourceforge.net/tracker/?func=detail&atid=418257&aid=3517324&group_id=36855 Undo only restores last link removed in Remove Redundant Links]
**** Tracker item for remaining issue: [http://sourceforge.net/tracker/?func=detail&atid=418257&aid=3517324&group_id=36855 Undo only restores last link removed in Remove Redundant Links]
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* Fixed data format to use 24 hours for writing ISO 8601 dates (e.g., creation_date). (Heiko)
* Fixed data format to use 24 hours for writing ISO 8601 dates (e.g., creation_date). (Heiko)


==Currently working on==
==Currently working on==
 
* [http://sourceforge.net/tracker/?func=detail&atid=3521387&aid=3517323&group_id=36855 link filter not working properly]
** I broke this in 2.1.1-b7 as a side effect of fixing another bug: [http://sourceforge.net/tracker/?func=detail&atid=3487892&aid=3517323&group_id=36855 In compound ancestor/descendant queries, relation list bad]
** Almost fixed


==Discussion==
==Discussion==
 
* Michael Ashburner reported that when he added two more remark: lines to gaz.obo (in a text editor) and then roundtripped it through OBO-Edit, it lost the last two remark: lines he put in.
** I am not completely sure I interpreted the scenario correctly.
** There is nothing in OE that limits how many remark lines you can have, and at any rate it seems odd that it would forget the last two remarks that were added (they are not the last two in the list, they are both somewhere in the middle of the list), so I suspect that there's a non-OE problem going on.
** He was using an extremely old version of OE but said that he also tried the latest version and had the same problem.
** I was unable to download gaz.obo from http://obo.cvs.sourceforge.net/viewvc/obo/obo/ontology/environmental/ (and Michael said the latest commit of it failed--maybe a SourceForge problem?)
* I would like to do another official release soon (which I think I'll call 2.2 because 2.1.1 is too confusing)
* I would like to do another official release soon (which I think I'll call 2.2 because 2.1.1 is too confusing)


==Links==
==Links==
[[OBO-Edit_Working_Group_Meeting_Agenda_and_Minutes|Back to OEWG meeting agenda and minutes list]]
[[OBO-Edit_Working_Group_Meeting_Agenda_and_Minutes|Back to OEWG meeting agenda and minutes list]]

Revision as of 00:49, 29 April 2012

OBO-Edit Working Group Meeting: Tuesday, April 17, 2012, 8:30am PDT

Conference call numbers:
US: 1 866 953 9688
UK: 0808 238 6001
PIN: 801561

Agenda/Chair: Nomi Harris
Minutes: Nomi
Attendees:

Bug and Feature Trackers

Fixed or newly added since last meeting

  • Fixed data format to use 24 hours for writing ISO 8601 dates (e.g., creation_date). (Heiko)

Currently working on

Discussion

  • Michael Ashburner reported that when he added two more remark: lines to gaz.obo (in a text editor) and then roundtripped it through OBO-Edit, it lost the last two remark: lines he put in.
    • I am not completely sure I interpreted the scenario correctly.
    • There is nothing in OE that limits how many remark lines you can have, and at any rate it seems odd that it would forget the last two remarks that were added (they are not the last two in the list, they are both somewhere in the middle of the list), so I suspect that there's a non-OE problem going on.
    • He was using an extremely old version of OE but said that he also tried the latest version and had the same problem.
    • I was unable to download gaz.obo from http://obo.cvs.sourceforge.net/viewvc/obo/obo/ontology/environmental/ (and Michael said the latest commit of it failed--maybe a SourceForge problem?)
  • I would like to do another official release soon (which I think I'll call 2.2 because 2.1.1 is too confusing)

Links

Back to OEWG meeting agenda and minutes list