Ontology meeting 2013-03-21: Difference between revisions

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3) Other follow-ups from last week: http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-14#Cell_cycle
3) Other follow-ups from last week: http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-14#Cell_cycle
===Annotation relations===
We've been discussing with Tony and Rachael ways we might constraint the number of relationships available to an annotator making an annotation extension. Tony would rather not have protein2go have to reason within the session for speed reasons...could we make subsets based on the object type in c16 e.g. cell type, gene, protein?





Revision as of 06:53, 20 March 2013

MINUTES:

ATTENDEES:


Cell cycle

1) Devote some time to bring Chris up to speed on the cell cycle meeting at EBI

2) Make a decision on cell cycle phases

3) Other follow-ups from last week: http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-14#Cell_cycle


Annotation relations

We've been discussing with Tony and Rachael ways we might constraint the number of relationships available to an annotator making an annotation extension. Tony would rather not have protein2go have to reason within the session for speed reasons...could we make subsets based on the object type in c16 e.g. cell type, gene, protein?


Testing new OBO-Edit release

Jane to report on test obo/OWL round-trip.


Envenomation and multi-organism regulation

Web Presence

David to report on (copying over from last week) making a shared doc with proposed new upper structure for a/ Main web documentation b/ Internal documentation in the Drupal book style. We can then all edit and migrate existing web content across.


SF upgrade

Follow-up from here: http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-7#SF_upgrade

Jane to report on migration of categories.


Protein complexes

Harold to follow up on checking the protein complex xps before we incorporate (see http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-7#Follow-up:_Protein_complexes).


Follow-up: Action potential

See AI here: http://wiki.geneontology.org/index.php/Ontology_meeting_2013-02-14#Action_potential