Ontology meeting 2013-03-28: Difference between revisions

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There is a request for an envenomation template. There seem to be no or very few xp defined for any of the existing envenomation terms and their related modulation/neg or pos regulation of process in other organism terms.
There is a request for an envenomation template. There seem to be no or very few xp defined for any of the existing envenomation terms and their related modulation/neg or pos regulation of process in other organism terms.
=== Dual taxon annotations ===
Transfer to c16? What about the role (host/symbiont) - also c16? 


===Beyond cell cycle: other phases in GO===
===Beyond cell cycle: other phases in GO===

Revision as of 10:03, 28 March 2013

MINUTES: Tanya

ATTENDEES:

Stuff for GOC

Agenda is here: http://wiki.geneontology.org/index.php/2013_Cambridge_GOC_Meeting_Agenda

Let's check it over and see if there's anything we want to change or add. Check the right people are presenting.

Envenomation

There is a request for an envenomation template. There seem to be no or very few xp defined for any of the existing envenomation terms and their related modulation/neg or pos regulation of process in other organism terms.

Dual taxon annotations

Transfer to c16? What about the role (host/symbiont) - also c16?

Beyond cell cycle: other phases in GO

menstrual cycle phase SF item (children: menarche, menopause, menstruation)

estrous cycle phase (children: diestrus, estrus, metestrus, proestrus)

Testing new OBO-Edit release

Jane to report on test obo/OWL round-trip.


SF upgrade

Follow-up from last week: (background is here: http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-7#SF_upgrade)

Jane to report on migration of categories; she put a ticket on SF asking them about the categories, and is still waiting to hear from them. Any news?


How do we want to define 'cellular' in GO terms?

Stems from discussions here

http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-7#Definition_of_.27cellular.27_in_GO_terms

and here

http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-14#Definition_of_.27cellular.27_in_GO_terms