Ontology meeting 2013-04-18: Difference between revisions

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PRO-PO-GO meeting
PRO-PO-GO meeting


<pre>The Coordinating Role of the Gene Ontology (Jane Lomax)
The Coordinating Role of the Gene Ontology (Jane Lomax)
:Questions to be addressed include:
:Questions to be addressed include:
::How does the GO view the division of labor with regard to describing
::How does the GO view the division of labor with regard to describing
Biological Processes (BPs) which are not within the scope of the GO BP
Biological Processes (BPs) which are not within the scope of the GO BP
ontology especially in regard to stage ontologies such as the cell
ontology especially in regard to stage ontologies such as the cell
life cycle ontology or the PO plant development stage ontology?
life cycle ontology or the PO plant development stage ontology?
::How are growth and development terms to be dealt with across organisms?
::How are growth and development terms to be dealt with across organisms?
::What are the lessons learned from the GO's experience in
::What are the lessons learned from the GO's experience in
coordinating with other ontologies using GO terms in definitions?</pre>
coordinating with other ontologies using GO terms in definitions?
:What is the strategy and timeline for integrating PO into cross-product definitions of plant-relevant BPs (analogous to the way in which CHEBI, CL and PRO are currently being used)?


===Cell type templates===
===Cell type templates===

Revision as of 11:54, 17 April 2013

Minutes: David

Attendees:


Let's devote the entire call to

Monthly update: Project Management in JIRA

And if we have time:

PRO-PO-GO meeting

The Coordinating Role of the Gene Ontology (Jane Lomax)
:Questions to be addressed include:
::How does the GO view the division of labor with regard to describing
Biological Processes (BPs) which are not within the scope of the GO BP
ontology especially in regard to stage ontologies such as the cell
life cycle ontology or the PO plant development stage ontology?
::How are growth and development terms to be dealt with across organisms?
::What are the lessons learned from the GO's experience in
coordinating with other ontologies using GO terms in definitions?
:What is the strategy and timeline for integrating PO into cross-product definitions of plant-relevant BPs (analogous to the way in which CHEBI, CL and PRO are currently being used)?

Cell type templates

Pascale has asked whether we could prioritise these. Perhaps we could roll some templates out soon?

Website

Can we somehow link to some of the Drupal pages that are finished like the ontology download page? It seems that the whole website is going to take some time.

Follow-up: Envenomation

See http://wiki.geneontology.org/index.php/Ontology_meeting_2013-03-28#Envenomation