Ontology meeting 2014-09-25

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Follow-up on 'transport'

See action items here - where are we? http://wiki.geneontology.org/index.php/Ontology_meeting_2014-09-11#Transport_terms_.28carried_over_from_last_week.29

Accumulation of inferred links

Redundant links (i.e. where A is_a B and something is classified under both A and B) are causing problems in cell cycle - there's a lot of mess it's difficult to see what's going on. Let's discuss where we are with the workflow and removing these automatically. Could we possibly do a one-off removal for now?

Inferences & Jenkins

See email thread [go-ontology] build-go-assert-inferences - Build # 92 - Failure!

negatively_regulates o part_of/positively_regulates o part_of

Did you add these chains yet Chris? Need them for SF 11166

MF refactoring follow-up

Paul T., please see editors' comments at the end of this doc: https://docs.google.com/document/d/1y-6to0vwEJHc3i3wdPnJoCAq910auPQp5jBvafpJvL0/edit#heading=h.x7xjmjjghqb5

TG template for 'cell migration'

What is the most appropriate relation to use? See email thread '[go-ontology] cell migration templates'

GO into NCIt

Monthly review of Jira tickets