Ontology meeting 2017-01-19

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Revision as of 12:12, 19 January 2017 by Paola (talk | contribs)
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Attendees:

Regrets:


Bluejeans: https://bluejeans.com/164681006

Problem with gene_ontology_write.obo

When loaded in OE gives an error at Line 31. This read

remark: Includes Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/go/never_in_taxon.owl>))) [Axioms: 18 Logical Axioms: 0]

I removed it, but keep getting the same error...

Chris to update on TG support going forward

BTW, a reminder that TG is still not sending out notification emails when terms are committed. Chris hopes to have something working again when we switch to using GitHub to manage the ontologies.

Tickets for discussion at this meeting:

See https://github.com/geneontology/go-ontology/projects/1, column labeled "Ontology Call January 19, 2017" on the right

  1. Contact for UniProt annotations
  2. Bridging ChEBI to Pro
  3. Phosphate versus phophate ion
  4. relationship between adenylate cyclase and cAMP biosynthetic process
  5. Remove all single-step BP classes
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