Ontology meeting 2019-02-11: Difference between revisions
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(Created page with "= Conference Line = See calendar for details = Agenda = ==Meetings== ===GOC Meeting Cambridge=== *GOC meeting - Cambridge, UK April 11th - 12th (right after ISB meeting) **...") |
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===David and Kimberly to NYC=== | ===David and Kimberly to NYC=== | ||
* David and Kimberly will visit Peter at the end of the month to discuss the Reactome imports and look closely at defining metabolic pathways using has_primary_input. | * David and Kimberly will visit Peter at the end of the month to discuss the Reactome imports and look closely at defining metabolic pathways using has_primary_input. | ||
* Where do we stand on getting the PR for the new primary input output relations and equivalence axioms in the ontology? | |||
==Discussion topics== | ==Discussion topics== | ||
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===Other business=== | ===Other business=== | ||
* https://github.com/geneontology/go-ontology/projects/1 | * https://github.com/geneontology/go-ontology/projects/1 | ||
===On Call=== | |||
* David, Harold, Tanya, Karen, Laurent-Phillippe, Kimberly, Barbara, EricD, Chris, Peter, Jim | |||
Latest revision as of 13:11, 11 February 2019
Conference Line
See calendar for details
Agenda
Meetings
GOC Meeting Cambridge
- GOC meeting - Cambridge, UK April 11th - 12th (right after ISB meeting)
- Make sure you have signed up and let's start thinking about what we want to present.
David and Kimberly to NYC
- David and Kimberly will visit Peter at the end of the month to discuss the Reactome imports and look closely at defining metabolic pathways using has_primary_input.
- Where do we stand on getting the PR for the new primary input output relations and equivalence axioms in the ontology?
Discussion topics
- Getting rid of regulates_o_part_of: The plan going forward
- Rob Hoehndorf preprint: "Formal axioms in biomedical ontologies improve analysis and interpretation of associated data"; analyzes GO-plus: https://www.biorxiv.org/content/10.1101/536649v1
- Jim has created the file, but I don't see it in the ticket. There are about 5000 lines.
Other business
On Call
- David, Harold, Tanya, Karen, Laurent-Phillippe, Kimberly, Barbara, EricD, Chris, Peter, Jim