Ontology meeting 2022-06-6: Difference between revisions
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**[https://github.com/geneontology/go-ontology/issues/23268 proteinogenic amino acid biosynthesis] and [https://github.com/geneontology/go-ontology/issues/23269 non-proteinogenic amino acid biosynthesis] | **[https://github.com/geneontology/go-ontology/issues/23268 proteinogenic amino acid biosynthesis] and [https://github.com/geneontology/go-ontology/issues/23269 non-proteinogenic amino acid biosynthesis] | ||
**Bring back co-factor biosynthetic process https://github.com/geneontology/go-ontology/issues/23267 | **Bring back co-factor biosynthetic process https://github.com/geneontology/go-ontology/issues/23267 | ||
*[https://github.com/geneontology/go-ontology/issues/22106 peptide alpha-N-acetyltransferase activity children cause true path violation] (Harold) | *[https://github.com/geneontology/go-ontology/issues/22106 peptide alpha-N-acetyltransferase activity children cause true path violation] (Harold) <<< resolved today. | ||
*[https://github.com/geneontology/go-ontology/issues/21524 UDP-beta-L-arabinofuranose transport & transporter] | *[https://github.com/geneontology/go-ontology/issues/21524 UDP-beta-L-arabinofuranose transport & transporter] | ||
** Pascale: subclasses calculated by Protégé not the same as those requested by user | ** Pascale: subclasses calculated by Protégé not the same as those requested by user | ||
Revision as of 11:26, 6 June 2022
- Group members: Pascale, Karen, Harold, Raymond, Peter, Jim, Tanya, Kimberly, David, Chris, Paul
- Present:
- Regrets:
Editors discussion tickets
- Antiporters & specificity (Pascale): https://github.com/geneontology/go-ontology/issues/23374
- Protein processing & specificity (Kimberly): https://github.com/geneontology/go-ontology/issues/23378
- Ligand processing and specificity: https://github.com/geneontology/go-ontology/issues/23378
- Antiporters reorganization: https://docs.google.com/presentation/d/11-C28wy_quSlbzhyNX0QZaUaZytdCpJkp9XL7vXGutg/edit?usp=sharing
- User requests:
- proteinogenic amino acid biosynthesis and non-proteinogenic amino acid biosynthesis
- Bring back co-factor biosynthetic process https://github.com/geneontology/go-ontology/issues/23267
- peptide alpha-N-acetyltransferase activity children cause true path violation (Harold) <<< resolved today.
- UDP-beta-L-arabinofuranose transport & transporter
- Pascale: subclasses calculated by Protégé not the same as those requested by user