Ontology meeting 2022-06-6

• Group members: Pascale, Karen, Harold, Raymond, Peter, Jim, Tanya, Kimberly, David, Chris, Paul
• Present:
• Regrets:

Editors discussion tickets

• Antiporters & specificity (Pascale): https://github.com/geneontology/go-ontology/issues/23374
• Protein processing & specificity (Kimberly): https://github.com/geneontology/go-ontology/issues/23378
• Ligand processing and specificity: https://github.com/geneontology/go-ontology/issues/23378

• Antiporters reorganization: https://docs.google.com/presentation/d/11-C28wy_quSlbzhyNX0QZaUaZytdCpJkp9XL7vXGutg/edit?usp=sharing

• User requests:
  • proteinogenic amino acid biosynthesis and non-proteinogenic amino acid biosynthesis
  • Bring back co-factor biosynthetic process https://github.com/geneontology/go-ontology/issues/23267
• peptide alpha-N-acetyltransferase activity children cause true path violation (Harold) <<< resolved today.
• UDP-beta-L-arabinofuranose transport & transporter
  • Pascale: subclasses calculated by Protégé not the same as those requested by user