Ontology meeting 2023-11-13

• Group members: Pascale, Raymond, Edith, Val, Steven, Jim, Tanya, Kimberly, Peter, David, Chris, Paul
• Present: Peter, Chris, Val, Pascale, Edith, Raymond, Jim, Kimberly, David,
• Regrets: Edith, Paul

Computed taxon constraints

Jim

• Computed TCs (from Uberon and other ontologies) are now in go-plus
• There are now redundant asserted TCs and computed TCs: should we remove redundant asserted TCs?
• (need to check that GO rules still uses go-plus in the GAFrencer)
• AI Pascale: create documentation: SOP for reviewing and suggesting new TCs; development terms (and others?) could be moved to Uberon and other ontologies, and all be computed

Questions/follow up on ongoing tickets

proteinogenic amino acid biosynthesis

• AI Edith to create a spreadsheet with the 20 proteinogenic amino acids biosynthesis terms, and we'll see which we need both an L and a D form.

Chris' proposal to decompose BPs in GO

• Chris's slides: Decomposition of macro biological processes in GO