PAINT-GONUTS integration (Retired): Difference between revisions
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== Display in GONUTS == | == Display in GONUTS == | ||
GONUTS GOsummary extension pulls all gene associations for a gene into the summary table and graph, not just those added from the PAINT GAF. | |||
* Currently IEA is excluded from the summary table and graph. Should other evidence codes be excluded | |||
* ISS to an ancestor node is now displayed as ISS-An in the table | |||
* How should qualifiers be handled. From the electronic jamborees, it was important to display NOT in the table. What about other qualifiers? | |||
Revision as of 12:01, 9 September 2009
Back to Reference_Genome_Annotation_Project
For at least some test cases, GONUTS will be used to display PAINT-based annotations so MODs can do quality control.
Importing the PAINT GAF into GONUTS
issues
Display in GONUTS
GONUTS GOsummary extension pulls all gene associations for a gene into the summary table and graph, not just those added from the PAINT GAF.
- Currently IEA is excluded from the summary table and graph. Should other evidence codes be excluded
- ISS to an ancestor node is now displayed as ISS-An in the table
- How should qualifiers be handled. From the electronic jamborees, it was important to display NOT in the table. What about other qualifiers?