Difference between revisions of "Phylogenetic Annotation Project"

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=[[PAINT_SOP|PAINT Curation guidelines]]=
=[[PAINT_SOP|PAINT Curation guidelines]]=


=[[PAINT_database_update_pipeline|PAINT Update pipeline]]=
=[[PAINT_database_update_pipeline|PAINT Update pipeline]]=
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=[[PAINT_GAF_production|PAINT GAF production]]=
=[[PAINT_GAF_production|PAINT GAF production]]=
==[[PAINT_GAF_QC-examples|PAINT_GAF_QC-examples]]==
==[[PAINT_GAF_QC-examples|PAINT_GAF_QC-examples]]==
= PAINT_Conference_Calls=
* Monthly, every First Tuesday of the month, 9 AM Pacific/6 PM Eurore starting Feb 2019
* [[PAINT_Conference_Calls]] Agendas and Minutes


= PAINT family curation tracking=
= PAINT family curation tracking=
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Those pages are kept as reference but the information in them is not the most current information.  
Those pages are kept as reference but the information in them is not the most current information.  
* [[Reference Genome Mailing list]] - disabled
* [[Reference Genome Mailing list]] - disabled
* [[Conference Calls]] - 2007-2016
* [[Electronic_jamborees| Electronic jamborees ]]
* [[Electronic_jamborees| Electronic jamborees ]]
* [[Annotation_pipeline]] By Judy, Suzi, Michael
* [[Annotation_pipeline]] By Judy, Suzi, Michael

Revision as of 04:59, 27 February 2019

Note that this project was formerly called the Reference Genome Annotation Project.

The Phylogenetic Annotation Project performs annotation inferences across evolutionary related proteins based on known function of proteins within PANTHER [1] phylogenetic family trees.

Phylogenetic annotation overview

PAINT User Guide

PAINT Curation guidelines

PAINT Update pipeline

PAINT GAF production

PAINT_GAF_QC-examples

PAINT_Conference_Calls

  • Monthly, every First Tuesday of the month, 9 AM Pacific/6 PM Eurore starting Feb 2019

PAINT family curation tracking

https://docs.google.com/spreadsheets/d/1uHgcaXO7t9__9GuXgBibT0H-YlnU252IsRGWIyhCWN8/edit?usp=sharing. Not updated since Panther 12

Pages to review

Archived & retired Pages

Those pages are kept as reference but the information in them is not the most current information.


Past Annotation targets

Target Gene List August 2006-April 2008