Projects stand up meeting 2021-06-30

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Attendees

  • Present: David, Kimberly, Pascale, Seth, Suzi, Paul + Tanya
  • Regrets: Chris
  • Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris

Announcements

GOC meeting dates: Oct 13-15 (Wed to Friday) - Announcement was emailed to go-consortium 2 weeks ago

Discussion points

Taxon constraints not filtering errors: https://github.com/geneontology/go-ontology/issues/21642 What is the priority on this?

-> Likely fixed, Pascale needs to check snapshot

TAIR - data load question

  • To be discussed in the second part of the call
  • Title: Multi-omics network-based functional annotation of unknown Arabidopsis genes (link to draft manuscript here - please keep confidential) "we developed a novel automated function prediction (AFP) algorithm(...) Next, we predicted biological process annotations for known and unknown genes in A. thaliana and validated our predictions using experimental protein-DNA and protein-protein interaction data (...)



Ongoing projects

Urgent bug

NEO - not loading all MGI entities: https://github.com/geneontology/neo/issues/70 Jim needed to help fix this

MOD imports

Kimberly and David described tasks - not all tickets are assigned yet; need Jim and probably Sierra



Topics reported to next week

Ontology

GAF2.2 Migration

Priorities

  • GPAD project
  • NEO

https://docs.google.com/spreadsheets/d/19-i43w0mGQdFYmKXqskVIgrDO-pVTWo1YgjaWa5PI1o/edit#gid=68094648

GOC meeting Action Points

action items

  • Are any of these items high priority?