Projects stand up meeting 2021-08-25

Attendees

• Present:
• Regrets:
• Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris

Announcements

• GOC meeting dates: Oct 12-14 (Tues to Thurs)

Discussion points

Taxon constraint

Planning meeting with Jim and others this week- we will report on tasks/resources/timeline next time

Outreach

Discussed open website tickets -

• Gene associations for Tribolium: Suzi/Kimberly

• https://github.com/geneontology/geneontology.github.io/pull/283 -> go_monthly-termdb.rdf-xml.gz
• https://github.com/geneontology/geneontology.github.io/pull/232 -> list of species per annotation file

Still need to be resolved

• Suzi will set up a call
• Paul will update http://geneontology.org/docs/submitting-go-annotations/

Projects update

MOD imports

• GPAD output
  • Jim addressed 2 out of the 3 tickets needed for the imports, David and Kimberly made a plan to address the 3rd

• MGI -> waiting for GPAD
• WormBase -> waiting for GPAD and round trip before asking Alex changed to the GPAD export he produces
• XenBase
• SGD (no tickets yet)
• ZFIN -> DONE - still fixing some issues on the ZFIN side WRT import code relative to evidence codes

Ontology

Next week: small transcription workshop on co-factors and ATP-dependent functions: Colin, Ruth, Val, Pascale, Helen