Projects update meeting 2022-06-22

Attendees

• Members: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris, Cynthia
• Present:

Ongoing work updates

Release/snapshop update

New release started

SynGO Updates

• Actions
  • PO: Paul T
  • TL: Dustin
  • Ask Frank at SynGO to check
  • Do we have some SOP? sanity checks?
    • David to provide list of MGI checks

1. Dustin will generate stats on the json to ttl conversion
2. Ask Frank at SynGO to check models on dev, proposed date to get feedback by: June 23rd
3. Make a syngo-specific pipeline to give them a report
4. We will put the models on prod no matter what in 2 weeks (whether or not we are able to do this work)
5. Produce a MOU (see below)

Model copy

Tasks required before moving to production

Machine learning methods for GO annotation prediction

• AI 2022-06-08 ARBA -> invite at a Annotation call for discussion
• Docs
  • https://gitlab.ebi.ac.uk/uniprot-public/unifire/-/blob/master/misc/media/UniFIRE-URML.pptx

MOU draft

• https://docs.google.com/document/d/1T1yW4dPaztjTJIkDPLBi3ob_-IGiqkP-kvGscprYijY/edit#
• update contributors list: http://geneontology.org/docs/go-consortium/
• unify with: http://geneontology.org/docs/annotation-contributors/
• http://geneontology.org/docs/collaborations/

Can this be automated from the yaml?

• CHRIS: YES!!!!

Potential priorities short list

https://docs.google.com/document/d/1TrxTZMRMAS0BCektM79nqvcZq8R3PXEMVWd_CbW-RfI/edit#heading=h.nntgv5th4cph