Projects update meeting 2022-06-29: Difference between revisions

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** schedule final round of testing - planned for this week
** schedule final round of testing - planned for this week
** deploy on prod - end of this week, early next week?
** deploy on prod - end of this week, early next week?
===Review relation documentation===
* We need a to generate a list of all relations currently used in Noctua and in P2GO
* We need to clearly list which relations are slated for obsoletion/not allowed for GO/GO-CAM curation
* We need to document usage for all valid relations (like we have started for has input, has output and occurs in)


===MOU draft===
===MOU draft===

Revision as of 02:18, 29 June 2022

Attendees

  • Members: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris, Cynthia
  • Present:
  • Regrets: David

Ongoing work updates

Adding SO terms as valid range for 'occurs in' annotation extension

  • Curators would like to be able to specify chromosomal regions where MFs occur
  • Right now, SO terms are not a valid range for 'occurs in'
  • Any reason(s) not to add SO terms as a valid range?
    • A few years ago, there was discussion of MSO vs SO that might have had some bearing on this, but that discussion seems to have tailed off.

SynGO Updates

  • Actions
    • PO: Paul T
    • TL: Dustin
    • Ask Frank at SynGO to check
    • Do we have some SOP? sanity checks?
      • David to provide list of MGI checks
  1. Dustin will generate stats on the json to ttl conversion
  2. Ask Frank at SynGO to check models on dev, proposed date to get feedback by: June 23rd
  3. Make a syngo-specific pipeline to give them a report
  4. We will put the models on prod no matter what in 2 weeks (whether or not we are able to do this work)
  5. Produce a MOU (see below)

Model copy

  • Tasks required before moving to production
  • Project meeting tomorrow on the Noctua work benches call, to know:
    • schedule final round of testing - planned for this week
    • deploy on prod - end of this week, early next week?

MOU draft

Can this be automated from the yaml?

  • CHRIS: YES!!!!

Potential priorities short list

https://docs.google.com/document/d/1TrxTZMRMAS0BCektM79nqvcZq8R3PXEMVWd_CbW-RfI/edit#heading=h.nntgv5th4cph