Projects update meeting 2022-07-20

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Attendees

  • Members: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris, Cynthia
  • Present:
  • Regrets:

Announcements

GOC meeting

Oct 11-13 at CalTech; a mix of in-person and remote

No GO calls the first 2 weeks of August

  • Many people are off the first week; the second week is the no GO calls week
  • Who is away next week?

David, Chris, others?

Ongoing work updates

Active Projects

Projects soon ready to be closed

Google drive move

https://github.com/orgs/geneontology/projects/90

  • Suzy to report on status & check on other people
  • Chris to move his files
  • Do we need to add any documentation (since we said documentation should be part of all projects) - would be worth it to write how we organize files, etc

Model copy

  • Status
  • Documentation?

SynGO Updates

Is the next task documentation?

Loading MGI non-mouse annoations into Protein2GO

Status

Noctua enhancements and bug fixes

Ontology updates in Minerva / Noctua

Status

====Visual Pathway Editor

  • Last tickets need testing/closing
  • Documentation needs to be completed

====Yeast Pathways

  • Dustin

Ongoing projects

Alliance software support

Is this active?

Relations to link MFs

  • Kimberly (PO), David, Pascale, Paul T (PI)
  • Aim to clarify use of relations to link MFs. This work may also entail creating new relations in RO. The deliverables are: a set of relations to links MFs, exemplar models and explanations, documentation, and a strategy for harmonizing existing relations with new guidelines.

[GO-CAM Enrichment]

Explore GO-CAM enrichment with PaulS's summer student Nick. PI: Chris (PaulS) PO: Kimberly TL: Dustin Other: Kimberly, Jim, Dustin

GO API refactor

Sierra

Software essential and proactive maintenance

Ongoing data QC and pipeline maintenance

To prioritize

Loading widgets into AmiGO

What's next? How high of a priority is this?

  • Need to decide exactly what we want - needs have a proper project and propose some specs and deliverables (and PI, PO, TL)

Potential priorities short list

https://docs.google.com/document/d/1TrxTZMRMAS0BCektM79nqvcZq8R3PXEMVWd_CbW-RfI/edit#heading=h.wjj6xn7cait3

MOU draft

Can this be automated from the yaml?

  • CHRIS: YES!!!!


To schedule for a future call

  • Paper planning: Chris and Nomi