Projects update meeting 2022-10-05: Difference between revisions

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=Priorities until the end of the year=
=Priorities until the end of the year=
Main tasks’ document: https://docs.google.com/document/d/17ikwodMNC_xwEGZhBre_tilw4Fd8NI1IWZ8KxefSPBU/edit
Main tasks’ document: https://docs.google.com/document/d/17ikwodMNC_xwEGZhBre_tilw4Fd8NI1IWZ8KxefSPBU/edit
where we list on which project we are each working on. This is based on the proposed priorities here: https://docs.google.com/document/d/1TrxTZMRMAS0BCektM79nqvcZq8R3PXEMVWd_CbW-RfI
where we list on which project we are each working on. This is based on the proposed priorities here: https://docs.google.com/document/d/1TrxTZMRMAS0BCektM79nqvcZq8R3PXEMVWd_CbW-RfI
   
   
'''AI for everyone:''' Look at the list of project and (a) add any missing project you are working on or (b) remove projects you are not working on (these can also be moved to later in the year)
'''AI for everyone:''' Look at the list of project and (a) add any missing project you are working on or (b) remove projects you are not working on (these can also be moved to later in the year)

Revision as of 20:30, 4 October 2022

Attendees

  • Members: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris, Cynthia
  • Present:
  • Regrets:


GOC meeting

  • The week after next (Oct 11-13)
  • The following week will be a no GO calls week (week of Sept 17th)

Priorities until the end of the year

Main tasks’ document: https://docs.google.com/document/d/17ikwodMNC_xwEGZhBre_tilw4Fd8NI1IWZ8KxefSPBU/edit where we list on which project we are each working on. This is based on the proposed priorities here: https://docs.google.com/document/d/1TrxTZMRMAS0BCektM79nqvcZq8R3PXEMVWd_CbW-RfI

AI for everyone: Look at the list of project and (a) add any missing project you are working on or (b) remove projects you are not working on (these can also be moved to later in the year) Entering your % effort on the project for this period

Ongoing projects update

API

Seth was to update the API specs document to specify the deliverables for the first part (ongoing), and to make a new document for the next part, "API reabsorb GO-CAM"

Bug fixes Visual Editor

  • 1 remaining ticket: fix UI to have 'Pathway Editor' rather than 'Visual Pathway Editor'
  • Can we get an estimate of when that will be done?

Relations to link MF

ongoing

Annotation Extension Relations in Noctua

Status

Improving GO-CAM browser usability

The plan was to

but some 'hack' was applied to more quickly only [Display only causal models on GO-CAM site https://github.com/geneontology/web-gocam/issues/20] Apply causalmf param to fetch causal gocam-models.json

  1. Do we still want to do the work in Update minerva to handle “maximal-causal-chain-length” and “display-as-pathway-override”, or down-prioritize this?
  2. Some questions about the way the current fix behaves - which is different from Alliance; is this what we want ? Note that this is already deployed
  3. Should we link to the Pathway editor from the GO-CAM site, rather than the Graph editor? The 'default' view is usually less overwhelming with the Pathway editor.

Tasks to enable people outside the GO consortium to curate GO-CAM models

Following up on last week's discussion about a few new requests for GO-CAM accounts

MOU individual users

Suzi: to draft a MOU for non-MOD users of GO-CAM who request accounts

User accounts

  • To manage new and external users, we proposed to create DEV accounts and have a mechanism to move DEV models to PROD directly. How much of a priority is this? If this is a high priority, who should be assigned to this?


Species-specific downloads

Seth and Pascale to draft a projects specs document