Projects update meeting 2023-03-01: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
Line 15: Line 15:
==Reference species==
==Reference species==
Seth
Seth
* Current load time ~ 2 days
* Seth proposes that this becomes an active project
* may need to get a new machine
* advantage is that this would be consistent with Panther & allow species-specific downloads
* Patrick can also work on this
* Announce enough in advance so that use dont have to maintain old and new files
* However: pipeline cleanup and API projects should be wrapped up before getting this started


=Projects reviews=
=Projects reviews=

Revision as of 12:11, 2 March 2023

Attendees

  • Members: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris, Cynthia
  • Present: Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris,
  • Regrets: David, Cynthia

Announcements

GOC consortium

Discussion points

  • uniprot-all file is confusing to users, because it is not at all the same file as the one provided by UniProt (GO Central filters to exclude most IEAs). Alex asks that we rename it.
    • Discussion: Need to understand what the difference is between the two files

Reference species

Seth

  • Current load time ~ 2 days
  • Seth proposes that this becomes an active project
  • may need to get a new machine
  • advantage is that this would be consistent with Panther & allow species-specific downloads
  • Patrick can also work on this
  • Announce enough in advance so that use dont have to maintain old and new files
  • However: pipeline cleanup and API projects should be wrapped up before getting this started

Projects reviews

https://github.com/orgs/geneontology/projects/108/views/3


Outreach plan

Suzi

Provide GO rules by 'assigned by'

Seth

GO API

Seth


Project management kaban

https://github.com/orgs/geneontology/projects/108/views/1

Proposed priorities for the next 6 months

Retrieved from "https://wiki.geneontology.org/index.php?title=Projects_update_meeting_2023-03-01&oldid=84891"