Projects update meeting 2024-07-10

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Attendees

  • Members: Chris, Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Cynthia
  • Present:
  • Regrets: Chris

Announcements

  • Chris out until July 24th
  • Pascale out July 29th- August 16th
  • Alex out until July 19th
  • Paul at ISMB/QfO July 12th- July 19th

Next GO meeting

  • 14 answers
  • responses quite split
  • (missing from legend: cyan: not sure about travel budget)

GPAD/GPI documentation

Suzi GPAD:

Relations. Where is the source of truth? Do we provide the relations in the website? Link to tech/full specs?

Evidence: Are we allowing any EC?


GPI:

what is the difference between "not mandatory, cardinality 0, 1, >1" and "optional, cardinality 0+"

Encoded by- this is different from DB:DB_Object_ID

Protein Containing Complex Members- this cannot be 1, correct?

Noctua form refactor concealing GO-CAM model

Kimberly https://github.com/orgs/geneontology/projects/148

Model metadata

  • Jim, Kimberly, Seth met on Monday, July 1st to discuss adding 'standard' metadata to models
  • Move next workbenches call up by 1/2 hour?

Other

  • Lengthy exchange on #noctua-technical yesterday?

MGI load

Pascale https://github.com/orgs/geneontology/projects/136

https://github.com/orgs/geneontology/projects/155

GO rules

Pascale https://github.com/orgs/geneontology/projects/107

Nothing to report. Anushya managed to run a new build but that doesn't seem to have fixed any of the open issues. Next meeting had to be scheduled, will probably happen this week or next.

GH Projects page

https://github.com/orgs/geneontology/projects/108