QC procedures from contributing groups
GOA QC Procedure
EBI (GOA pipeline) filters the following annotations from their files:
- Annotations with unmapped identifiers: need to be able to map to a UniProt accession (or RNAcentral or ComplexPortal ID) in order to be able to import annotations.
- Annotations to obsolete GO terms for which no replacement is available
- Annotations to GO terms that are flagged as do_not_(manually_)annotate
- Annotations with an invalid combination of evidence code and with/from, as governed by the rules in https://github.com/geneontology/go-site/blob/master/metadata/eco-usage-constraints.yaml