RG: Software: AmiGO

Ref Genome Integration with AmiGO

Current issues

Summary

• List should not be ordered by count [DONE]
• Add alphabetical key to summary [DONE]
• Clearer statistical reporting on the summary
• Experimental only view (IDA, IMP, IGI, IEP, IPI) [UNNECESSARY NOW?]
  • Show/hide by evidence code [UNNECESSARY NOW?]

Graph

• General slowness
• Backup to SVG (PNG download?) [DONE]
• Separate the three ontologies
• Experimental only view (IDA, IMP, IGI, IEP, IPI) [UNNECESSARY NOW?]
  • Show/hide by evidence code [UNNECESSARY NOW?]

Current bugs

• Gibberish on zoom out (eventually resolved) --Tanya [???]

Current testing site

The current site for integration can be found here