https://wiki.geneontology.org/index.php?title=RefGenProgress_2008-06-04_(Archived)&feed=atom&action=history
RefGenProgress 2008-06-04 (Archived) - Revision history
2024-03-28T08:43:37Z
Revision history for this page on the wiki
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https://wiki.geneontology.org/index.php?title=RefGenProgress_2008-06-04_(Archived)&diff=66647&oldid=prev
Pascale: Pascale moved page RefGenProgress 2008-06-04 to RefGenProgress 2008-06-04 (Archived)
2018-01-16T14:51:29Z
<p>Pascale moved page <a href="/RefGenProgress_2008-06-04" class="mw-redirect" title="RefGenProgress 2008-06-04">RefGenProgress 2008-06-04</a> to <a href="/RefGenProgress_2008-06-04_(Archived)" title="RefGenProgress 2008-06-04 (Archived)">RefGenProgress 2008-06-04 (Archived)</a></p>
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Pascale
https://wiki.geneontology.org/index.php?title=RefGenProgress_2008-06-04_(Archived)&diff=66646&oldid=prev
Pascale at 14:51, 16 January 2018
2018-01-16T14:51:21Z
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Pascale
https://wiki.geneontology.org/index.php?title=RefGenProgress_2008-06-04_(Archived)&diff=19468&oldid=prev
Midori at 11:35, 2 April 2009
2009-04-02T11:35:28Z
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Midori
https://wiki.geneontology.org/index.php?title=RefGenProgress_2008-06-04_(Archived)&diff=13691&oldid=prev
Pascale at 14:13, 4 June 2008
2008-06-04T14:13:40Z
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 10:13, 4 June 2008</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>A list sent by Val : </div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>A list sent by Val : </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Here is a set of 20 (Pascal and Rex happy)</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*Here is a set of 20 (Pascal and Rex happy)</div></td></tr>
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Pascale
https://wiki.geneontology.org/index.php?title=RefGenProgress_2008-06-04_(Archived)&diff=13690&oldid=prev
Pascale: New page: ===New genes for June === A list sent by Val : *Here is a set of 20 (Pascal and Rex happy) *Conserved in mainly single copy, even in plant (everyone happy, especially Tanya) *No E coli (J...
2008-06-04T14:12:21Z
<p>New page: ===New genes for June === A list sent by Val : *Here is a set of 20 (Pascal and Rex happy) *Conserved in mainly single copy, even in plant (everyone happy, especially Tanya) *No E coli (J...</p>
<p><b>New page</b></p><div>===New genes for June ===<br />
A list sent by Val : <br />
*Here is a set of 20 (Pascal and Rex happy)<br />
*Conserved in mainly single copy, even in plant (everyone happy, especially Tanya)<br />
*No E coli (Jim and Debbie very happy)<br />
*I can’t find ANY papers for any of these in any organism (except the occasional high localization experiment in yeast)…they seem to be mainly nuclear or nucleolar (find some process data which can be ISS’d to and I’ll be happy, but there should be very little work for everyone)<br />
<br />
*problem from previous list of conserved genes (pasted from Val's email): It isn’t surprising that Tanya got so many. This is because we are trying to select orthologs with single copy in every organism including E.coli. This selection is mainly metabolic pathway, and some ribosomal proteins. Ribosomal proteins tend to be present in two (or more) copies in many organisms. The metabolic pathway enzymns are frequently present in 2 or 4 copies in plants (some seem to be recruited to secondary metabolic pathways). I think in the selection procedure we outlined in Princeton we said were aiming for single copy, but the copy number could be greater for a couple of orgs, unfortunately this will usually be the case for bacterially conserved genes which means a large workload for TAIR<br />
<br />
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Back to [[Reference_Genome_Annotation_Project]]</div>
Pascale