RefGenome12Feb08 Phone Conference (Archived): Difference between revisions

Revision as of 19:22, 8 February 2008

Tuesday February 12, 10 AM CDT (8 AM PDT, 4 PM BST)

Present

Next Reference Genome Meeting

April 20-21, Salt Lake City

This will be followed by a GO Consortium Meeting on April 22 and 23 in Salt Lake City.

Karen Eilbeck: host

Orthology determination

Kara: update

Curation tool update

Chris, Siddhartha, Seth, Mary, Pascale, David, Doug

Updated graphs

Mary

I have posted new refG graphs (temporarily) at:

[1] We will move them to the GO site when refG folks have had a chance to review them (some time next week?)

To simplify comparison of organism annotations (and following Chris' lead on detecting outliers) I have modified the comparison matrix to show only high order GO terms, e.g. PEX1 [2] or POLA [3]

Please review the graphs and let me know if you notice missing orthologs or annotations -- I am still doing a lot of data editing manually :(

Next conference call

Tuesday March 11, 2008, 1 PM CDT, 11 AM PDT, 7 PM GMT

Return to Reference_Genome_Annotation_Project

@@ Line 16: / Line 16: @@
 ==Curation tool update==
 Chris, Siddhartha, Seth, Mary, Pascale, David, Doug
+==Updated graphs==
+Mary
+* I have posted new refG graphs (temporarily) at:
+[http://proto.informatics.jax.org/prototypes/GOgraphEX/RefGenomeGraphs/]
+We will move them to the GO site when refG folks have had a chance to review them (some time next week?)
+To simplify comparison of organism annotations (and following Chris' lead on detecting outliers) I have modified the comparison matrix to show only high order GO terms, e.g.
+PEX1 [http://proto.informatics.jax.org/prototypes/GOgraphEX/RefGenomeGraphs/5189.html#Slim]
+or
+POLA [http://proto.informatics.jax.org/prototypes/GOgraphEX/RefGenomeGraphs/5422.html#Slim]
+Please review the graphs and let me know if you notice missing orthologs or annotations -- I am still doing a lot of data editing manually  :(