Schizosaccharomyces pombe (Retired): Difference between revisions
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[[Reference Genome Annotation Project|Return to Reference Genome Annotation Project Main Page]] | [[Reference Genome Annotation Project|Return to Reference Genome Annotation Project Main Page]] | ||
Latest revision as of 11:24, 12 April 2019
Return to Reference Genome Annotation Project Main Page
Return to Reference Genome Publication Counts
Here is my description of the pombe reference genome triage process.
L - Total Publications
The total number of papers linked to an S. pombe gene using a PubMed search for all identifiers associated with that gene and/ or gene product fission yeast.i.e SPBC19G7.01c OR msh2 OR swi8 OR mut3 OR SPBC24C6.12c OR msh2p) AND (pombe OR fission yeast)
M - Triaged papers
The number of publications after filtering for i) wrong gene (i.e. name conflicts) ii) wrong organism iii) not relevant to GO
N - Number of papers read
This number sometimes increases the original number in columns L and M because curated papers sometimes lead to non listed papers (usually larger screens which do not specify gene names in the keywords).
O - Number of papers producing GO annotations
The final number which provided 1+ GO annotations with experimental evidence