User contributions for Pascale

12:0612:06, 22 April 2024 diff hist +11‎ m Ontology meeting 2024-04-22 ‎ →‎Guidelines for defxrefs current
11:4611:46, 22 April 2024 diff hist +123‎ m Ontology meeting 2024-04-22 ‎No edit summary

06:4206:42, 21 April 2024 diff hist +387‎ m Ontology meeting 2024-04-22 ‎No edit summary

22:2722:27, 19 April 2024 diff hist +306‎ m Ontology meeting 2024-04-22 ‎No edit summary
21:5621:56, 19 April 2024 diff hist +34‎ m Ontology meeting 2024-04-22 ‎No edit summary
21:5421:54, 19 April 2024 diff hist +34‎ m Ontology meeting 2024-04-22 ‎No edit summary
21:4821:48, 19 April 2024 diff hist +126‎ m Ontology meeting 2024-04-22 ‎ →‎Work on automating processes and QC
21:4721:47, 19 April 2024 diff hist +80‎ m Ontology meeting 2024-04-22 ‎ →‎Work on automating processes and QC
21:4621:46, 19 April 2024 diff hist +16‎ m Ontology Development ‎ →‎Other group members current
21:4521:45, 19 April 2024 diff hist −33‎ m Ontology Development ‎ →‎Group Leader
21:4421:44, 19 April 2024 diff hist +2‎ m Ontology meeting 2024-04-22 ‎No edit summary
21:4421:44, 19 April 2024 diff hist 0‎ m Ontology meeting 2024-04-22 ‎No edit summary
21:4321:43, 19 April 2024 diff hist +102‎ m Ontology meeting 2024-04-22 ‎ →‎Guidelines for defxrefs
20:0320:03, 19 April 2024 diff hist +41‎ m Ontology meeting 2024-04-22 ‎No edit summary
11:3111:31, 19 April 2024 diff hist +115‎ m Projects update meeting 2024-04-24 ‎No edit summary current
11:2711:27, 19 April 2024 diff hist +1,722‎ N Projects update meeting 2024-04-24 ‎ Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: ==GO meeting== * Registration 'closed' * Monday: users meeting: https://docs.google.com/document/d/1sIamECzTS5IMOy4GeldzWXdawnmOLvT9s5vClMAs3Bo/edit * Friday: managers meeting * Draft agenda: https://docs.google.com/document/d/1FwGxa4jx8rJFjWBcbn4Q7ZzOHCY6-oF0azOrtK3quyk/edit#heading=h.2jptrbvdxk9r ==GO calls: reduced frequency== * Managers: twice monthly (un..."
11:2211:22, 19 April 2024 diff hist +41‎ m Project stand up meetings ‎ →‎2024 current

02:1502:15, 12 April 2024 diff hist −1‎ m Guidelines for new Molecular Functions ‎ →‎NAD/NADP cofactors current
02:1502:15, 12 April 2024 diff hist +6‎ m Guidelines for new Molecular Functions ‎ →‎NAD/NADP cofactors
01:5801:58, 12 April 2024 diff hist +11‎ m Guidelines for GO textual definitions ‎ →‎Guidelines on chemical nomenclature current
01:5701:57, 12 April 2024 diff hist 0‎ m Guidelines for GO textual definitions ‎ →‎Guidelines on chemical nomenclature
01:5701:57, 12 April 2024 diff hist +80‎ m Guidelines for GO textual definitions ‎ →‎Guidelines on chemical nomenclature
01:5501:55, 12 April 2024 diff hist +62‎ m Guidelines for GO textual definitions ‎ →‎Guidelines on chemical nomenclature
01:5101:51, 12 April 2024 diff hist +392‎ m Guidelines for GO textual definitions ‎No edit summary
01:4701:47, 12 April 2024 diff hist −1‎ m Ontology editors' manual ‎ →‎Ontology editing principles current
01:4701:47, 12 April 2024 diff hist +29‎ m Guidelines for creating a GO term ‎ →‎Review Status current
01:4701:47, 12 April 2024 diff hist 0‎ m Ontology editors' manual ‎ →‎How-to:Protégé instructions
01:4601:46, 12 April 2024 diff hist −100‎ m Ontology editors' manual ‎ →‎How-to:Protégé instructions
01:4601:46, 12 April 2024 diff hist −113‎ m Guidelines for creating a Regulation Term ‎No edit summary current
01:4501:45, 12 April 2024 diff hist +49‎ m Guidelines for creating a Regulation Term ‎ Redirected page to Guidelines for creating a GO term Tag: New redirect
01:4401:44, 12 April 2024 diff hist −8‎ m Guidelines for creating a GO term ‎No edit summary
01:4301:43, 12 April 2024 diff hist +1,605‎ m Guidelines for creating a GO term ‎No edit summary
01:4201:42, 12 April 2024 diff hist +7‎ m Ontology editors' manual ‎ →‎Ontology editing principles
01:4101:41, 12 April 2024 diff hist +41‎ m Ontology editors' manual ‎No edit summary
01:4001:40, 12 April 2024 diff hist −18‎ m Ontology editors' manual ‎ →‎Ontology editing principles

12:1112:11, 11 April 2024 diff hist +31‎ m Ontology editors' conference call minutes 2024 ‎No edit summary current
12:1012:10, 11 April 2024 diff hist 0‎ m Ontology editors' conference call minutes 2024 ‎No edit summary
12:1012:10, 11 April 2024 diff hist +41‎ N Ontology meeting 2024-04-15 ‎ Pascale moved page Ontology meeting 2024-04-15 to Ontology meeting 2024-04-22 current Tag: New redirect
12:1012:10, 11 April 2024 diff hist 0‎ m Ontology meeting 2024-04-22 ‎ Pascale moved page Ontology meeting 2024-04-15 to Ontology meeting 2024-04-22
01:5101:51, 11 April 2024 diff hist +107‎ m Ontology meeting 2024-04-22 ‎No edit summary

12:5312:53, 10 April 2024 diff hist +119‎ m Ontology meeting 2024-04-22 ‎No edit summary
12:5112:51, 10 April 2024 diff hist +313‎ m Ontology meeting 2024-04-22 ‎No edit summary

14:5714:57, 9 April 2024 diff hist +312‎ m Projects update meeting 2024-04-09 ‎ →‎Issues arising from users questions
14:5514:55, 9 April 2024 diff hist +149‎ m Projects update meeting 2024-04-09 ‎No edit summary
14:5214:52, 9 April 2024 diff hist +73‎ m Projects update meeting 2024-04-09 ‎No edit summary
14:4914:49, 9 April 2024 diff hist +485‎ N Projects update meeting 2024-04-09 ‎ Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: ==GO meeting== * Registration by April 12th * Agenda by May 1st * Which days do we need on either side? * Draft agenda: https://docs.google.com/document/d/1FwGxa4jx8rJFjWBcbn4Q7ZzOHCY6-oF0azOrtK3quyk/edit#heading=h.2jptrbvdxk9r * GO Users meeting: https://docs.google.com/document/d/1sIamECzTS5IMOy4GeldzWXdawnmOLvT9s5vClMAs3Bo/edit Category: GO Managers..."
14:4314:43, 9 April 2024 diff hist +40‎ m Project stand up meetings ‎ →‎2024
02:0802:08, 9 April 2024 diff hist +216‎ m Annotation Conf. Call 2024-04-09 ‎ →‎GO Release Pipeline
01:5701:57, 9 April 2024 diff hist +137‎ 10 April 2024 PAINT Conference Call ‎ →‎Agenda current

14:0414:04, 8 April 2024 diff hist +159‎ m Ontology meeting 2024-04-08 ‎No edit summary current
12:0912:09, 8 April 2024 diff hist +85‎ m Ontology meeting 2024-04-08 ‎ →‎New subsets yaml
10:1710:17, 8 April 2024 diff hist +157‎ N Ontology meeting 2024-04-22 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: ''' * '''Regrets:''' Jim Category:Meetings"
10:1610:16, 8 April 2024 diff hist +41‎ m Ontology editors' conference call minutes 2024 ‎No edit summary
08:4908:49, 8 April 2024 diff hist +270‎ m Ontology meeting 2024-04-08 ‎No edit summary

11:1811:18, 27 March 2024 diff hist +27‎ m Projects update meeting 2024-03-27 ‎ →‎ Pipeline current
11:1111:11, 27 March 2024 diff hist −1‎ m Projects update meeting 2024-03-27 ‎ →‎| Pipeline
11:1011:10, 27 March 2024 diff hist −2‎ m Projects update meeting 2024-03-27 ‎ →‎Update on projects
11:1011:10, 27 March 2024 diff hist +68‎ m Projects update meeting 2024-03-27 ‎ →‎Update on projects
03:2203:22, 27 March 2024 diff hist +2,330‎ m Ontology meeting 2024-04-08 ‎No edit summary

11:5411:54, 26 March 2024 diff hist +993‎ N Projects update meeting 2024-03-27 ‎ Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: = Discussion topics = ==GO meeting== * Registration form by March 15th * Agenda by May 1st * Which days do we need on either side? * Draft agenda: https://docs.google.com/document/d/1FwGxa4jx8rJFjWBcbn4Q7ZzOHCY6-oF0azOrtK3quyk/edit#heading=h.2jptrbvdxk9r * GO Users meeting: https://docs.google.com/document/d/1sIamECzTS5IMOy4GeldzWXdawnmOLvT9s5vClMAs3Bo/edit..."
11:1411:14, 26 March 2024 diff hist +141‎ m Rolling build of the Gene Ontology ‎No edit summary current
06:2406:24, 26 March 2024 diff hist +93‎ m Ontology meeting 2024-04-08 ‎ →‎Discussion points
06:2406:24, 26 March 2024 diff hist +549‎ N Ontology meeting 2024-04-08 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: ''' =Discussion points= * Ontobot action to add a term to the 'do not annotate' subset does not create the comment we used to have (something like, "This term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term.") ** Should Ontobot also do that? ** Can we/should we add a check t..."
06:2106:21, 26 March 2024 diff hist +6‎ m Ontology meeting 2024-03-25 ‎No edit summary current
06:2106:21, 26 March 2024 diff hist +40‎ m Ontology editors' conference call minutes 2024 ‎No edit summary

12:1212:12, 25 March 2024 diff hist +268‎ m Ontology meeting 2024-03-25 ‎No edit summary
12:0612:06, 25 March 2024 diff hist +8‎ m Ontology meeting 2024-03-25 ‎No edit summary
12:0312:03, 25 March 2024 diff hist +12‎ m Ontology meeting 2024-03-25 ‎No edit summary
12:0112:01, 25 March 2024 diff hist +8‎ m Ontology meeting 2024-03-25 ‎No edit summary
12:0112:01, 25 March 2024 diff hist +66‎ m Ontology meeting 2024-03-25 ‎No edit summary
04:3804:38, 25 March 2024 diff hist +160‎ N Ontology meeting 2024-03-25 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: ''' =Discussion points= Category:Meetings"
04:3704:37, 25 March 2024 diff hist +41‎ m Ontology editors' conference call minutes 2024 ‎No edit summary

15:4215:42, 20 March 2024 diff hist +16‎ m Rolling build of the Gene Ontology ‎No edit summary
15:3915:39, 20 March 2024 diff hist +35‎ m Rolling build of the Gene Ontology ‎ →‎Purpose of the rolling build of GO
15:3815:38, 20 March 2024 diff hist +307‎ m Rolling build of the Gene Ontology ‎No edit summary
15:3415:34, 20 March 2024 diff hist 0‎ m Main Page ‎ →‎Resources for GO annotation contributing groups current
15:3315:33, 20 March 2024 diff hist +48‎ N Daily version of the Gene Ontology ‎ Pascale moved page Daily version of the Gene Ontology to Rolling build of the Gene Ontology current Tag: New redirect
15:3315:33, 20 March 2024 diff hist 0‎ m Rolling build of the Gene Ontology ‎ Pascale moved page Daily version of the Gene Ontology to Rolling build of the Gene Ontology

14:4414:44, 19 March 2024 diff hist +6‎ m Rolling build of the Gene Ontology ‎No edit summary
14:4214:42, 19 March 2024 diff hist +361‎ m Rolling build of the Gene Ontology ‎No edit summary
14:2614:26, 19 March 2024 diff hist +48‎ N Rolling build of the Gene Ontology ‎ Created page with " Category:Ontology Category:GO Editors"
14:2514:25, 19 March 2024 diff hist +41‎ m Main Page ‎No edit summary
04:1704:17, 19 March 2024 diff hist +176‎ m Annotation Conf. Call 2024-03-19 ‎No edit summary

13:3913:39, 18 March 2024 diff hist +85‎ m Adding and Removing GO Subsets (Slims) ‎No edit summary current
12:4012:40, 18 March 2024 diff hist +89‎ m Ontology meeting 2024-03-18 ‎ →‎Document how to add terms in batch to a do-not-annotate subset directly from the github web interface current
12:3612:36, 18 March 2024 diff hist +203‎ m Ontology meeting 2024-03-18 ‎ →‎ChEBI 7.3 terms
12:3012:30, 18 March 2024 diff hist −2‎ m Ontology meeting 2024-03-18 ‎ →‎ChEBI 7.3 terms
06:0806:08, 18 March 2024 diff hist +49‎ m Interpretation of Travis checks errors ‎No edit summary current
06:0706:07, 18 March 2024 diff hist 0‎ N File:Travis error inferences diff.png ‎No edit summary current
06:0606:06, 18 March 2024 diff hist +308‎ m Interpretation of Travis checks errors ‎No edit summary
04:4704:47, 18 March 2024 diff hist +91‎ m Adding and Removing GO Subsets (Slims) ‎ →‎Removing a subset

12:0812:08, 15 March 2024 diff hist +365‎ m Ontology meeting 2024-03-18 ‎ →‎Discussion points
11:1811:18, 15 March 2024 diff hist +78‎ m Ontology editors' manual ‎ →‎Useful references
08:0108:01, 15 March 2024 diff hist 0‎ m Ontology meeting 2024-03-18 ‎No edit summary
07:5307:53, 15 March 2024 diff hist +114‎ m Ontology meeting 2024-03-18 ‎ →‎Using an ensemble of LLMs to evaluate GO-RHEA mappings
06:3406:34, 15 March 2024 diff hist +1‎ m Adding and Removing GO Subsets (Slims) ‎No edit summary
05:5705:57, 15 March 2024 diff hist −3‎ m GO slim overhaul (completed 2009) ‎ →‎REDONE 2023 current
05:5705:57, 15 March 2024 diff hist +28‎ m GO slim overhaul (completed 2009) ‎No edit summary
05:5705:57, 15 March 2024 diff hist +14‎ m GO slim overhaul (completed 2009) ‎No edit summary
05:5605:56, 15 March 2024 diff hist +178‎ m GO slim overhaul (completed 2009) ‎No edit summary
05:5605:56, 15 March 2024 diff hist +134‎ m GO slim overhaul (completed 2009) ‎No edit summary
05:5105:51, 15 March 2024 diff hist +220‎ m Procedure to check subset coverage ‎No edit summary current
05:4705:47, 15 March 2024 diff hist +782‎ m Procedure to check subset coverage ‎No edit summary
05:4105:41, 15 March 2024 diff hist +808‎ N Procedure to check subset coverage ‎ Created page with "# Checking GO annotation coverage #* Go to [https://www.ebi.ac.uk/QuickGO/ QuickGO], click on [https://www.ebi.ac.uk/QuickGO/annotations View Annotations] #* On the drop down menus at the top of the page, add filters as appropriate: #** Taxon(s) or taxonomic range (it is possible to select for example NBCITaxon:2 for all bacteria) #** Gene Products: it is usually desirable to select only Reviewed entry and Reference proteomes (either "Gene centric, canonical", or "Gene..."
05:3305:33, 15 March 2024 diff hist +48‎ m Ontology editors' manual ‎ →‎How-to:Protégé instructions

12:4312:43, 13 March 2024 diff hist +131‎ m Annotation guidelines ‎ →‎General Annotation Documentation current
11:0811:08, 13 March 2024 diff hist +229‎ m Projects update meeting 2024-03-13 ‎ →‎Discussion topics current
10:0010:00, 13 March 2024 diff hist +146‎ m Projects update meeting 2024-03-13 ‎ →‎Update on projects
09:5909:59, 13 March 2024 diff hist −5‎ m Projects update meeting 2024-03-13 ‎No edit summary
09:1109:11, 13 March 2024 diff hist −1‎ m Located in ‎ →‎Relations Ontology current
08:5908:59, 13 March 2024 diff hist +1‎ m Annotation Relations ‎ →‎Standard Annotation: Gene Product to Term (gp2term) Relations current
02:2502:25, 13 March 2024 diff hist +517‎ m Guidelines for database cross references ‎No edit summary current

10:5910:59, 12 March 2024 diff hist −246‎ m Annotation Conf. Call 2024-03-12 ‎ →‎Change to taxon constraint metadata flag
07:0007:00, 12 March 2024 diff hist +151‎ m Projects update meeting 2024-03-13 ‎ →‎Update on projects
06:5806:58, 12 March 2024 diff hist +15‎ m Projects update meeting 2024-03-13 ‎ →‎Attendees
06:5806:58, 12 March 2024 diff hist +1,172‎ N Projects update meeting 2024-03-13 ‎ Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: = Discussion topics = ==GO meeting== * Registration form by March 15th * Agenda by May 1st ==Update on projects== ===[https://github.com/orgs/geneontology/projects/61 SGD Noctua migration]=== ===[https://github.com/geneontology/project-management/issues/77 MGI remainders]=== * GAF/GPAD and Isoforms * '''Questions:''' * Which ‘upstream annotations’ are converted..."
05:5105:51, 12 March 2024 diff hist +70‎ m Ontology meeting 2024-02-26 ‎No edit summary current
05:5005:50, 12 March 2024 diff hist +9‎ m Ontology meeting 2024-03-18 ‎No edit summary
05:5005:50, 12 March 2024 diff hist +724‎ N Ontology meeting 2024-03-18 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: ''' =Discussion points= ==Refactoring nitrogen cycle processes== Chris' proposal to refactor nitrogen cycle processes (important for proks and plants, but also general lessons learned): https://github.com/geneontology/go-ontology/issues/27217 ==How to add terms in batch to a do-not-annotate subset directly from the github web interface== See documentation he..."
05:3205:32, 12 March 2024 diff hist +41‎ m Ontology editors' conference call minutes 2024 ‎No edit summary
03:2503:25, 12 March 2024 diff hist +192‎ m Annotation Conf. Call 2024-03-12 ‎ →‎Do Not Annotate Subsets

13:0413:04, 11 March 2024 diff hist +63‎ m Ontology meeting 2024-03-11 ‎No edit summary current
13:0113:01, 11 March 2024 diff hist +59‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:5612:56, 11 March 2024 diff hist 0‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:5512:55, 11 March 2024 diff hist +79‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:5512:55, 11 March 2024 diff hist −83‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:5412:54, 11 March 2024 diff hist +86‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:5212:52, 11 March 2024 diff hist +35‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:4712:47, 11 March 2024 diff hist +142‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:3512:35, 11 March 2024 diff hist −48‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:3412:34, 11 March 2024 diff hist +64‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:0712:07, 11 March 2024 diff hist +103‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
12:0612:06, 11 March 2024 diff hist +250‎ m Ontology meeting 2024-03-11 ‎ →‎How to add terms in batch to a do-not-annotate subset directly from the github web interface
08:2008:20, 11 March 2024 diff hist +60‎ m Guidelines for GO textual definitions ‎ →‎Standard definitions for specific terms
02:0702:07, 11 March 2024 diff hist +128‎ m Ontology meeting 2024-03-11 ‎No edit summary
02:0202:02, 11 March 2024 diff hist +536‎ N Ontology meeting 2024-03-11 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: ''' =Discussion points= ==Refactoring nitrogen cycle processes== Chris' proposal to refactor nitrogen cycle processes (important for proks and plants, but also general lessons learned): https://github.com/geneontology/go-ontology/issues/27217 ==How to add terms in batch to a do-not-annotate subset directly from the github web interface== ==Using an ensemble..."
02:0102:01, 11 March 2024 diff hist +41‎ m Ontology editors' conference call minutes 2024 ‎No edit summary

09:5109:51, 28 February 2024 diff hist +15‎ m Projects update meeting 2024-02-28 ‎No edit summary
09:3909:39, 28 February 2024 diff hist +3‎ m Projects update meeting 2024-02-28 ‎No edit summary
09:3809:38, 28 February 2024 diff hist +1,101‎ N Projects update meeting 2024-02-28 ‎ Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: = Discussion topics = ==Update on projects== ===[https://github.com/orgs/geneontology/projects/61 SGD Noctua migration]=== ===[https://github.com/geneontology/project-management/issues/77 MGI remainders] * GAF/GPAD and Isoforms * '''Questions:''' * Which ‘upstream annotations’ are converted from PR to MGI identifiers? * Possible approaches: *# Do nothing, i.e...."

07:4807:48, 26 February 2024 diff hist +123‎ m Ontology meeting 2024-02-26 ‎No edit summary

11:0011:00, 23 February 2024 diff hist +235‎ N Ontology meeting 2024-02-26 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: ''' =Discussion points= ==CheEBI 7.3 list== https://github.com/geneontology/go-ontology/issues/27059 Category:Meetings"
10:5910:59, 23 February 2024 diff hist +100‎ m Ontology editors' conference call minutes 2024 ‎No edit summary

10:2010:20, 20 February 2024 diff hist +12‎ m Ontology editors' manual ‎ →‎Ontology editing principles

12:4212:42, 14 February 2024 diff hist −1‎ m Projects update meeting 2024-02-14 ‎ →‎Active projects
12:4112:41, 14 February 2024 diff hist +145‎ m Projects update meeting 2024-02-14 ‎ →‎SGD Noctua migration
12:0812:08, 14 February 2024 diff hist −2‎ m Projects update meeting 2024-02-14 ‎ →‎GOC meeting
12:0412:04, 14 February 2024 diff hist +24‎ m Projects update meeting 2024-02-14 ‎ →‎GOC meeting
10:2310:23, 14 February 2024 diff hist +93‎ m New member onboarding ‎ →‎Checklist for all Gene Ontology Consortium Members and Contributors
09:4109:41, 14 February 2024 diff hist +4‎ m Projects update meeting 2024-02-14 ‎ →‎SGD Noctua migration
09:3409:34, 14 February 2024 diff hist +139‎ m Projects update meeting 2024-02-14 ‎ →‎SGD Noctua migration

11:3311:33, 13 February 2024 diff hist −4‎ m Part of ‎ Changed redirect target from Part of - deprecated to Part of relation current Tag: Redirect target changed
11:3211:32, 13 February 2024 diff hist +32‎ m Part of - deprecated ‎ Redirected page to Part of relation current Tag: New redirect
10:4510:45, 13 February 2024 diff hist −533‎ m Annotation usage examples for each annotation extension relation ‎ →‎Relations in Protein2GO graph not in the lists above current
10:4510:45, 13 February 2024 diff hist −71‎ m Annotation usage examples for each annotation extension relation ‎ →‎Relations
09:2709:27, 13 February 2024 diff hist −1‎ m Projects update meeting 2024-02-14 ‎ →‎GOC meeting
09:2709:27, 13 February 2024 diff hist +348‎ m Projects update meeting 2024-02-14 ‎No edit summary
09:2209:22, 13 February 2024 diff hist +140‎ m Projects update meeting 2024-02-14 ‎ →‎Active projects
09:2109:21, 13 February 2024 diff hist +2‎ m Projects update meeting 2024-02-14 ‎No edit summary
09:2009:20, 13 February 2024 diff hist +79‎ m Ontology meeting 2024-02-12 ‎No edit summary current
09:1909:19, 13 February 2024 diff hist +121‎ m Ontology meeting 2024-02-12 ‎ →‎User request: gasoreceptor activity
09:1809:18, 13 February 2024 diff hist +57‎ N Talk:Stabilizes ‎ Created page with "==== Heading text ==== This relation has been deprecated." current

08:3108:31, 12 February 2024 diff hist +133‎ m RHEA and EC mappings ‎No edit summary current
07:5807:58, 12 February 2024 diff hist +191‎ m Ontology meeting 2024-02-12 ‎ →‎Discussion points

13:2513:25, 8 February 2024 diff hist +37‎ m Ontology meeting 2024-02-12 ‎No edit summary
08:2008:20, 8 February 2024 diff hist +122‎ m Ontology meeting 2024-02-12 ‎No edit summary
08:1208:12, 8 February 2024 diff hist +338‎ m Ontology meeting 2024-02-12 ‎No edit summary

09:1609:16, 7 February 2024 diff hist 0‎ m Ontology meeting 2024-02-12 ‎ →‎Automatic mappings
09:1609:16, 7 February 2024 diff hist +485‎ m Ontology meeting 2024-02-12 ‎ →‎Automatic mappings
05:4105:41, 7 February 2024 diff hist −3‎ m Currency chemicals ‎No edit summary current
05:1505:15, 7 February 2024 diff hist +291‎ m Currency chemicals ‎No edit summary
04:4304:43, 7 February 2024 diff hist +46‎ m Currency chemicals ‎No edit summary
04:4204:42, 7 February 2024 diff hist −3‎ m Currency chemicals ‎No edit summary
04:4204:42, 7 February 2024 diff hist +164‎ m Currency chemicals ‎No edit summary
04:3304:33, 7 February 2024 diff hist +87‎ m Currency chemicals ‎No edit summary
03:1903:19, 7 February 2024 diff hist +14‎ m Inferred from Sequence or structural Similarity (ISS) ‎No edit summary

10:0410:04, 6 February 2024 diff hist +3,264‎ N Ontology meeting 2024-02-12 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: =Discussion points= ==Automatic mappings== From Chris in this ticket: https://github.com/geneontology/go-ontology/issues/26941 skos:exactMatch is transitive so we can assert inferences from this. GO:x exactMatch RHEA:y exactMatch MetaCyc:z ==> GO:x exactMatch MetaCyc:z * Can we have a script that handles this? * RHEA Exact matches? ==Blocking issues==..."
10:0110:01, 6 February 2024 diff hist +41‎ m Ontology editors' conference call minutes 2024 ‎No edit summary
06:2806:28, 6 February 2024 diff hist +15‎ m Has output ‎ →‎What not to capture current
06:2606:26, 6 February 2024 diff hist +9‎ m Currency chemicals ‎No edit summary
06:2506:25, 6 February 2024 diff hist +682‎ m Currency chemicals ‎No edit summary
06:2106:21, 6 February 2024 diff hist +15‎ m Currency chemicals ‎No edit summary
06:2006:20, 6 February 2024 diff hist −86‎ m Currency chemicals ‎No edit summary
06:1706:17, 6 February 2024 diff hist −175‎ m Currency chemicals ‎No edit summary
06:1606:16, 6 February 2024 diff hist −57‎ m Currency chemicals ‎No edit summary
06:1506:15, 6 February 2024 diff hist +96‎ m Currency chemicals ‎No edit summary
06:0306:03, 6 February 2024 diff hist +1,360‎ m Currency chemicals ‎No edit summary
06:0006:00, 6 February 2024 diff hist +1,444‎ N Currency chemicals ‎ Created page with " {| class="wikitable" |+ Caption text |- ! ChEBI ID !! Chemical |- | [https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:15377 CHEBI:15377] || H2O |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example || Example |- | Example..."
05:5805:58, 6 February 2024 diff hist +16‎ m Has input ‎ →‎What not to capture current

02:5002:50, 31 January 2024 diff hist −27‎ m Ontology meeting 2021-08-02 ‎No edit summary current
02:4902:49, 31 January 2024 diff hist +28‎ m Ontology meeting 2021-08-02 ‎No edit summary

03:3803:38, 30 January 2024 diff hist −14‎ m Protein complexes ‎ →‎GO definition of a protein-containing complex current

06:5206:52, 29 January 2024 diff hist +1,014‎ m Ontology meeting 2024-01-29 ‎No edit summary current
06:4706:47, 29 January 2024 diff hist +34‎ m Ontology editors' manual ‎ →‎Ontology editing principles
06:4606:46, 29 January 2024 diff hist +8‎ m Ontology editors' manual ‎ →‎Ontology editing principles
06:4606:46, 29 January 2024 diff hist +19‎ m Ontology editors' manual ‎ →‎Ontology editing principles
06:4506:45, 29 January 2024 diff hist +58‎ m Ontology editors' manual ‎ →‎Ontology editing principles

12:5712:57, 24 January 2024 diff hist +3,466‎ N Ontology meeting 2024-01-29 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present: =Discussion points= ==Blocking issues on ongoing tickets== ==Proposal to switch to 'has primary input'== * Relations have been changed in the ontology months ago * Proposal (Kimberly): ** update existing annotations in Noctua and Protein2GO ** Get the list of currency chemicals (Reactome?) - added to Pathways2GO agend for 2024-01-25 ** Curator call: discuss u..."

11:3111:31, 23 January 2024 diff hist 0‎ File:Precomposed term replacement.png ‎ Pascale uploaded a new version of File:Precomposed term replacement.png current
11:2511:25, 23 January 2024 diff hist 0‎ File:Precomposed term replacement.png ‎ Pascale uploaded a new version of File:Precomposed term replacement.png
11:2211:22, 23 January 2024 diff hist +1‎ m Annotation Conf. Call 2024-01-23 ‎ →‎Automatic replacements for 'x signaling involved in y' BPs
11:2211:22, 23 January 2024 diff hist 0‎ m Annotation Conf. Call 2024-01-23 ‎ →‎Automatic replacements for 'x signaling involved in y' BPs
11:2211:22, 23 January 2024 diff hist +6‎ m Annotation Conf. Call 2024-01-23 ‎ →‎Automatic replacements for 'x signaling involved in y' BPs
11:2111:21, 23 January 2024 diff hist +42‎ m Annotation Conf. Call 2024-01-23 ‎ →‎Automatic replacements for 'x signaling involved in y' BPs
11:2111:21, 23 January 2024 diff hist 0‎ N File:Precomposed term replacement.png ‎No edit summary
09:3009:30, 23 January 2024 diff hist 0‎ m Projects update meeting 2024-01-24 ‎No edit summary
06:3906:39, 23 January 2024 diff hist −812‎ m Projects update meeting 2024-01-24 ‎No edit summary
06:3706:37, 23 January 2024 diff hist +52‎ m Projects update meeting 2024-01-24 ‎ →‎Noctua form improvement specs
06:3606:36, 23 January 2024 diff hist +60‎ m Projects update meeting 2024-01-24 ‎ →‎Noctua Form UI improvement
06:3506:35, 23 January 2024 diff hist −261‎ m Projects update meeting 2024-01-24 ‎No edit summary
06:2906:29, 23 January 2024 diff hist +5‎ m Projects update meeting 2024-01-24 ‎ →‎Discussion topics
06:2906:29, 23 January 2024 diff hist +4‎ m Projects update meeting 2024-01-24 ‎ →‎Discussion topics
06:2706:27, 23 January 2024 diff hist +70‎ m Projects update meeting 2024-01-24 ‎ →‎Discussion topics

15:2115:21, 22 January 2024 diff hist +62‎ m Projects update meeting 2024-01-24 ‎ →‎Discussion topics
15:1215:12, 22 January 2024 diff hist +23‎ m Ontology meeting 2024-01-22 ‎ →‎alpha-ketoglutarate (aka 2-oxoglutarate) dehydrogenase complex terms current
14:0614:06, 22 January 2024 diff hist +71‎ m Ontology meeting 2024-01-22 ‎No edit summary
13:4713:47, 22 January 2024 diff hist 0‎ m Ontology meeting 2024-01-22 ‎ →‎Stress-activated MAPK cascade
13:4613:46, 22 January 2024 diff hist +358‎ m Ontology meeting 2024-01-22 ‎ →‎Stress-activated MAPK cascade
11:3811:38, 22 January 2024 diff hist −59‎ m Ontology meeting 2024-01-22 ‎ →‎involved_in_x_y
11:3611:36, 22 January 2024 diff hist 0‎ m Ontology meeting 2024-01-22 ‎ →‎transport
09:1809:18, 22 January 2024 diff hist +165‎ m Ontology meeting 2024-01-22 ‎ →‎Ongoing tickets
05:1205:12, 22 January 2024 diff hist +132‎ m Ontology meeting 2024-01-22 ‎ →‎Objectives & Priorities for 2024
05:1105:11, 22 January 2024 diff hist +172‎ m Ontology meeting 2024-01-22 ‎No edit summary
04:4904:49, 22 January 2024 diff hist −3‎ m Installing and Using git ‎ →‎Resetting password on command line (mac) current
04:4104:41, 22 January 2024 diff hist +62‎ m Ontology meeting 2024-01-22 ‎ →‎Regulation closure for taxon constraints
04:2904:29, 22 January 2024 diff hist +136‎ m Ontology meeting 2024-01-22 ‎ →‎Review design patterns (continued from last week)
04:2704:27, 22 January 2024 diff hist +390‎ m Ontology meeting 2024-01-22 ‎ →‎Discussion points
04:1404:14, 22 January 2024 diff hist −17‎ m Ontology meeting 2024-01-22 ‎No edit summary
04:1304:13, 22 January 2024 diff hist +2,864‎ N Ontology meeting 2024-01-22 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present:''' * '''Regrets:''' =Announcements= =Discussion points= ==Objectives & Priorities for 2024== ===New term requests=== Remain high priority ===BP refactor=== Pascale & Paul ===Review design patterns (continued from last week)=== Repo: https://github.com/geneontology/go-ontology/tree/master/docs/patterns * [https://github.com/geneontology/go-ontology/labels/desi..."

04:4604:46, 18 January 2024 diff hist −51‎ m Ontology editors' manual ‎ →‎Ongoing Projects
04:4604:46, 18 January 2024 diff hist −42‎ m Ontology editors' manual ‎ →‎Ongoing Projects

09:1509:15, 17 January 2024 diff hist +111‎ m Ontology meeting 2024-01-08 ‎ →‎transport current
02:1502:15, 17 January 2024 diff hist +10‎ m Projects update meeting 2024-01-17 ‎No edit summary current
02:1402:14, 17 January 2024 diff hist +156‎ N Projects update meeting 2024-01-17 ‎ Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: =Announcements= Category: GO Managers Meetings"
02:1302:13, 17 January 2024 diff hist +28‎ m Project stand up meetings ‎ →‎2024
02:1202:12, 17 January 2024 diff hist +41‎ m Project stand up meetings ‎ →‎Agenda and Minutes

04:2204:22, 11 January 2024 diff hist +146‎ N Protein2GO specific processes ‎ Created page with "* Annotation blacklist: https://www.ebi.ac.uk/internal-tools/protein2go/talisman.html?database=production&alias=goapro Category: Annotation" current
04:2104:21, 11 January 2024 diff hist +36‎ m Annotation guidelines ‎ →‎Focused annotation projects

15:5915:59, 10 January 2024 diff hist +2,452‎ N Projects update meeting 2024-01-24 ‎ Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: https://github.com/geneontology/noctua/issues/856 ==Objectives Jan/Feb 2024== Assuming we still aim for 2-month sprints; maybe this work requires more than 2 months ===Pipeline stabilization=== Agree on objectives: * for eg 1 snapshot a week * minimally we need to produce the ontology and export annotations generated in Noctua. * Maybe for stability, data export and..."
12:3712:37, 10 January 2024 diff hist +46‎ m Projects update meeting 2024-01-10 ‎ →‎Objectives Jan/Feb 2024 current
12:3312:33, 10 January 2024 diff hist +54‎ m Projects update meeting 2024-01-10 ‎ →‎Pipeline stabilization
12:3112:31, 10 January 2024 diff hist +22‎ m Projects update meeting 2024-01-10 ‎ →‎Pipeline stabilization
12:3112:31, 10 January 2024 diff hist +81‎ m Projects update meeting 2024-01-10 ‎ →‎Pipeline stabilization
12:2912:29, 10 January 2024 diff hist +78‎ m Projects update meeting 2024-01-10 ‎ →‎Pipeline stabilization
12:2812:28, 10 January 2024 diff hist +79‎ m Projects update meeting 2024-01-10 ‎ →‎Pipeline stabilization
12:2312:23, 10 January 2024 diff hist +121‎ m Projects update meeting 2024-01-10 ‎ →‎Pipeline stabilization
12:2212:22, 10 January 2024 diff hist +167‎ m Projects update meeting 2024-01-10 ‎ →‎Pipeline stabilization
12:0912:09, 10 January 2024 diff hist −7‎ m Projects update meeting 2023-02-01 ‎ →‎Attendees current
10:3510:35, 10 January 2024 diff hist 0‎ m Project stand up meetings ‎ →‎2024

11:1611:16, 9 January 2024 diff hist +1‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
11:1611:16, 9 January 2024 diff hist +778‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
05:4705:47, 9 January 2024 diff hist +51‎ m Protege5 6 setup for GO Eds ‎ →‎Review Status current
05:4605:46, 9 January 2024 diff hist +33‎ m Protege5 6 setup for GO Eds ‎ →‎Instructions for new Protege users
05:4505:45, 9 January 2024 diff hist 0‎ N File:New entities.png ‎No edit summary current
05:4505:45, 9 January 2024 diff hist +121‎ m Protege5 6 setup for GO Eds ‎ →‎Setting ID range

15:2215:22, 8 January 2024 diff hist +227‎ m Projects update meeting 2024-01-10 ‎No edit summary
12:3912:39, 8 January 2024 diff hist +26‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
12:3712:37, 8 January 2024 diff hist +91‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
12:2412:24, 8 January 2024 diff hist −9‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
12:2412:24, 8 January 2024 diff hist +250‎ m Ontology meeting 2024-01-08 ‎ →‎Review design patterns
12:1712:17, 8 January 2024 diff hist +366‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
12:1112:11, 8 January 2024 diff hist −28‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
12:0912:09, 8 January 2024 diff hist +3‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
12:0812:08, 8 January 2024 diff hist +1‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
12:0212:02, 8 January 2024 diff hist +101‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
12:0112:01, 8 January 2024 diff hist +291‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
11:4511:45, 8 January 2024 diff hist +71‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
11:4411:44, 8 January 2024 diff hist +122‎ m Ontology meeting 2024-01-08 ‎ →‎Objectives & Priorities for 2024
10:5710:57, 8 January 2024 diff hist +432‎ m Ontology meeting 2024-01-08 ‎No edit summary
10:3610:36, 8 January 2024 diff hist +209‎ m Ontology meeting 2024-01-08 ‎No edit summary
10:0610:06, 8 January 2024 diff hist +176‎ N Ontology meeting 2024-01-08 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present:''' * '''Regrets:''' =Discussion points= Category:Meetings"
10:0510:05, 8 January 2024 diff hist +241‎ N Ontology editors' conference call minutes 2024 ‎ Created page with "* Jan 1 - No GO calls - holidays * Jan 8 * Jan 15 ---- No call - US holiday - MLK * Jan 22 * Jan 29 Category:Meetings Category:Ontology"
09:5909:59, 8 January 2024 diff hist +59‎ m Ontology Development ‎ →‎Agenda and Minutes

02:3502:35, 21 December 2023 diff hist −4‎ m Projects update meeting 2024-01-10 ‎ →‎Objectives Jan/Feb 2024
02:3402:34, 21 December 2023 diff hist +593‎ m Projects update meeting 2024-01-10 ‎No edit summary
01:5401:54, 21 December 2023 diff hist +201‎ m Projects update meeting 2024-01-10 ‎No edit summary

15:4015:40, 18 December 2023 diff hist −25‎ m UniProt-GOA datasources ‎No edit summary current
15:4015:40, 18 December 2023 diff hist +22‎ m UniProt-GOA datasources ‎No edit summary
04:5004:50, 18 December 2023 diff hist −32‎ m Project stand up meetings ‎ →‎Agenda and Minutes
04:5004:50, 18 December 2023 diff hist −6‎ m Project stand up meetings ‎ →‎2023
04:4004:40, 18 December 2023 diff hist +694‎ N Projects update meeting 2024-01-10 ‎ Created page with "= Attendees = * Members: Kimberly, Pascale, Seth, Suzi, Jim, Huaiyu, Paul, Chris, Cynthia * Present: =Announcements= Calls are now scheduled for the 2nd and 4th Wednesday of the month. =Projects status= * [https://github.com/orgs/geneontology/projects/108/views/1 https://github.com/geneontology/project-management/issues/85] * Pipeline stablilization objectives: ** for eg 1 snapshot a week ** minimally we need to produce the ontology and export annotations generated i..."
04:3604:36, 18 December 2023 diff hist +295‎ m Project stand up meetings ‎ →‎Agenda and Minutes
04:3404:34, 18 December 2023 diff hist +29‎ m Project stand up meetings ‎ →‎When and how to join

13:3213:32, 12 December 2023 diff hist +102‎ m Projects update meeting 2023-12-13 ‎ →‎Discussion topics
12:2912:29, 12 December 2023 diff hist +580‎ m Annotation Conf. Call 2023-12-12 ‎ →‎Colocalizes with Counts by terms
12:2812:28, 12 December 2023 diff hist +6,744‎ m Annotation Conf. Call 2023-12-12 ‎No edit summary
06:0306:03, 12 December 2023 diff hist +298‎ m Protein complexes ‎ →‎GO definition of a protein-containing complex
06:0106:01, 12 December 2023 diff hist +77‎ m Protein complexes ‎ →‎In scope
05:5605:56, 12 December 2023 diff hist +322‎ m Projects update meeting 2023-12-13 ‎No edit summary
05:5405:54, 12 December 2023 diff hist +271‎ m Ontology meeting 2023-12-11 ‎No edit summary current
05:5205:52, 12 December 2023 diff hist +199‎ m Ontology meeting 2023-12-11 ‎ →‎User feedback
05:5005:50, 12 December 2023 diff hist +63‎ m Ontology meeting 2023-12-11 ‎No edit summary
05:5005:50, 12 December 2023 diff hist −36‎ m Ontology editors' conference call minutes 2023 ‎No edit summary current
05:4905:49, 12 December 2023 diff hist +547‎ m Projects update meeting 2023-12-13 ‎ →‎Discussion topics
04:2404:24, 12 December 2023 diff hist +128‎ m Annotation Conf. Call 2023-12-12 ‎ →‎Annotation Relations
04:2004:20, 12 December 2023 diff hist +170‎ m Annotation Conf. Call 2023-12-12 ‎ →‎Annotation Relations
03:2803:28, 12 December 2023 diff hist −7‎ m Projects update meeting 2023-12-13 ‎No edit summary
03:2803:28, 12 December 2023 diff hist +379‎ m Projects update meeting 2023-12-13 ‎ →‎Slims versus ribbons

16:1916:19, 11 December 2023 diff hist +385‎ m Projects update meeting 2023-12-13 ‎No edit summary
16:1516:15, 11 December 2023 diff hist +222‎ N Projects update meeting 2023-12-13 ‎ Created page with "= Attendees = * Members: David, Jim, Kimberly, Pascale, Seth, Suzi, Huaiyu, Paul, Chris, Cynthia * Present: =Projects status= https://github.com/orgs/geneontology/projects/108/views/1 Category: GO Managers Meetings"

12:4912:49, 7 December 2023 diff hist 0‎ m Inferred from Electronic Annotation (IEA) ‎ →‎Quality Control Checks current

07:3307:33, 5 December 2023 diff hist +2‎ m Ontology meeting 2023-12-11 ‎ →‎User feedback
07:3307:33, 5 December 2023 diff hist +309‎ m Ontology meeting 2023-12-11 ‎ →‎Discussion points

09:3209:32, 1 December 2023 diff hist +1,249‎ N Ontology meeting 2023-12-11 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, David, Chris, Paul * '''Present:''' * '''Regrets:''' =Discussion points= ==Def and synonym cross-references== EC and RHEA are sometimes used in def xref, and EC if often used in synonym xref. This is really tedious to update when the EC or RHEA IDs change. Can we change this to, for example: GOC:EC and GOC:RHEA, and only maintain the actual cross references in xrefs? Example [Te..."
06:3106:31, 1 December 2023 diff hist +633‎ m Projects update meeting 2023-11-29 ‎No edit summary current

05:0205:02, 30 November 2023 diff hist +76‎ m Ontology meeting 2023-11-27 ‎No edit summary current
04:3404:34, 30 November 2023 diff hist −16‎ m UniProt-GOA datasources ‎No edit summary
04:3004:30, 30 November 2023 diff hist +1‎ m UniProt-GOA datasources ‎No edit summary
03:2403:24, 30 November 2023 diff hist −26‎ m UniProt-GOA datasources ‎No edit summary
03:2303:23, 30 November 2023 diff hist −520‎ m UniProt-GOA datasources ‎No edit summary
03:2303:23, 30 November 2023 diff hist +9‎ m UniProt-GOA datasources ‎ →‎GOCentral/ Noctua Internal sources
03:2103:21, 30 November 2023 diff hist −2,126‎ m UniProt-GOA datasources ‎ →‎GOA internal sources
03:0303:03, 30 November 2023 diff hist +3‎ m UniProt-GOA datasources ‎ →‎GOA internal sources
03:0303:03, 30 November 2023 diff hist +2,203‎ m UniProt-GOA datasources ‎No edit summary

12:0412:04, 29 November 2023 diff hist +1‎ m Projects update meeting 2023-11-29 ‎No edit summary
11:3911:39, 29 November 2023 diff hist +133‎ m Projects update meeting 2023-11-29 ‎No edit summary
04:2604:26, 29 November 2023 diff hist +53‎ m Main Page ‎ →‎Resources for GO annotation contributing groups
04:2504:25, 29 November 2023 diff hist +20‎ m Main Page ‎ →‎Resources for GO annotation contributing groups

12:0012:00, 27 November 2023 diff hist +120‎ m Adding Taxon Restrictions ‎No edit summary current
08:4608:46, 27 November 2023 diff hist +76‎ m Projects update meeting 2023-11-29 ‎No edit summary
08:4508:45, 27 November 2023 diff hist +71‎ m Projects update meeting 2023-11-15 ‎No edit summary current
08:3808:38, 27 November 2023 diff hist +38‎ m Projects update meeting 2023-11-15 ‎No edit summary
08:3808:38, 27 November 2023 diff hist +189‎ m Projects update meeting 2023-11-15 ‎No edit summary
08:3608:36, 27 November 2023 diff hist +39‎ m Projects update meeting 2023-11-15 ‎No edit summary
08:3008:30, 27 November 2023 diff hist +290‎ N Projects update meeting 2023-11-29 ‎ Created page with "= Attendees = * Members: David, Jim, Kimberly, Pascale, Seth, Suzi, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: =Main points and AI from Fall 2023 GOC meeting= https://docs.google.com/document/d/15ePOkbY4whF5kQIabieFD5JfxfHdclUqoHcyykmqzK0/edit Category: GO Managers Meetings"
04:5204:52, 27 November 2023 diff hist +1,550‎ m Ontology meeting 2023-11-27 ‎No edit summary

11:2711:27, 24 November 2023 diff hist +941‎ N Ontology meeting 2023-11-27 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Jim, Tanya, Kimberly, Peter, David, Chris, Paul * '''Present:''' * '''Regrets:''' =Discussion points= * MetaCyc now requires a subscription; what is the GO policy WRT links? * Pascale - I dont have access to the site anymore, so I cannot verify the reactions. * One suggestion would be to limit to using RHEA mappings : https://ftp.expasy.org/databases/rhea/tsv/rhea2metacyc.tsv and any mapping not there would be r..."

09:5609:56, 22 November 2023 diff hist −69‎ m UniProt-GOA datasources ‎No edit summary

15:2915:29, 20 November 2023 diff hist −1‎ m Projects update meeting 2023-10-25 ‎ →‎Release schedule current
15:2915:29, 20 November 2023 diff hist 0‎ m Projects update meeting 2023-10-25 ‎ →‎Release schedule
14:5114:51, 20 November 2023 diff hist +69‎ m Ontology meeting 2023-11-20 ‎No edit summary current
13:1013:10, 20 November 2023 diff hist +11‎ m Ontology meeting 2023-11-20 ‎ →‎Change 'only in taxon' to 'in taxon'
13:0913:09, 20 November 2023 diff hist +50‎ m Ontology meeting 2023-11-20 ‎ →‎Change 'only in taxon' to 'in taxon'
13:0813:08, 20 November 2023 diff hist +86‎ m Ontology meeting 2023-11-20 ‎ →‎Change 'only in taxon' to 'in taxon'

08:1008:10, 17 November 2023 diff hist +142‎ m Ontology meeting 2023-11-20 ‎No edit summary
05:3205:32, 17 November 2023 diff hist +196‎ m Ontology meeting 2023-11-20 ‎No edit summary
05:3005:30, 17 November 2023 diff hist +111‎ m Ontology meeting 2023-11-20 ‎No edit summary
05:2305:23, 17 November 2023 diff hist +479‎ N Ontology meeting 2023-11-20 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Steven, Jim, Tanya, Kimberly, Peter, David, Chris, Paul * '''Present:''' * '''Regrets:''' =Ontology tickets= ==Questions/follow up on ongoing tickets== [https://github.com/geneontology/go-ontology/issues/23268 proteinogenic amino acid biosynthesis] * '''AI''' Edith to create a spreadsheet with the 20 proteinogenic amino acids biosynthesis terms, and we'll see which we need both an L and a D form. Category:Meetin..."
05:1605:16, 17 November 2023 diff hist −2‎ m Ontology meeting 2023-11-13 ‎No edit summary current

12:0312:03, 15 November 2023 diff hist +88‎ m Projects update meeting 2023-11-15 ‎ →‎Debrief SAB meeting

13:0613:06, 13 November 2023 diff hist +17‎ m Ontology meeting 2023-11-13 ‎No edit summary
09:1709:17, 13 November 2023 diff hist −200‎ m Ontology meeting 2023-10-30 ‎ →‎New relation to link interspecies interactions terms current

08:0508:05, 2 November 2023 diff hist +175‎ m Ontology meeting 2023-11-13 ‎ →‎Computed taxon constraints
08:0408:04, 2 November 2023 diff hist +1,021‎ N Ontology meeting 2023-11-13 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Steven, Jim, Tanya, Kimberly, Peter, David, Chris, Paul * '''Present:''' Peter, Chris, Val, Pascale, Edith, Raymond, Jim, Kimberly * '''Regrets:''' David ==Computed taxon constraints== Jim * Computed TCs (from Uberon and other ontologies) are now in go-plus * There are now redundant asserted TCs and computed TCs: should we remove redundant asserted TCs? * (need to check that GO rules still uses go-plus in the GAFre..."

04:5104:51, 31 October 2023 diff hist +152‎ m Ontology meeting 2023-10-30 ‎No edit summary

14:5114:51, 30 October 2023 diff hist +262‎ m Annotation Conf. Call 2023-10-31 ‎ →‎Annotation Review
14:0614:06, 30 October 2023 diff hist +160‎ m Projects update meeting 2023-11-01 ‎ →‎Prepare for SAB meeting
12:0912:09, 30 October 2023 diff hist +9‎ m Ontology meeting 2023-10-30 ‎No edit summary
12:0312:03, 30 October 2023 diff hist +5‎ m Ontology meeting 2023-10-30 ‎No edit summary
12:0312:03, 30 October 2023 diff hist +57‎ m Ontology meeting 2023-10-30 ‎No edit summary
11:3311:33, 30 October 2023 diff hist 0‎ m Ontology editors' conference call minutes 2023 ‎No edit summary
03:2003:20, 30 October 2023 diff hist +1‎ m Ontology editors' conference call minutes 2023 ‎No edit summary
03:1903:19, 30 October 2023 diff hist +93‎ m Ontology meeting 2023-10-30 ‎No edit summary
03:1903:19, 30 October 2023 diff hist +107‎ m Ontology meeting 2023-10-30 ‎No edit summary
03:0103:01, 30 October 2023 diff hist +15‎ m Ontology meeting 2023-10-30 ‎No edit summary
03:0003:00, 30 October 2023 diff hist +118‎ m Ontology meeting 2023-10-30 ‎No edit summary
02:5902:59, 30 October 2023 diff hist −14‎ m Ontology editors' conference call minutes 2023 ‎No edit summary
02:5902:59, 30 October 2023 diff hist −3,141‎ Ontology meeting 2023-10-23 ‎ Blanked the page current Tag: Blanking
02:5902:59, 30 October 2023 diff hist +3,141‎ N Ontology meeting 2023-10-30 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Steven, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present:''' * '''Regrets:''' ==[https://github.com/geneontology/go-ontology/issues/25933 Cell to cell signaling terms]== Request was to * Replace "epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification GO:0060802, with epiblast cell-extraembryonic ectoderm cell signaling (Single EXP to PMID:14511481) * Replace "..."

04:1904:19, 26 October 2023 diff hist +143‎ m Projects update meeting 2023-10-25 ‎ →‎Prepare for SAB meeting

12:0212:02, 25 October 2023 diff hist +13‎ m Proposed Developments to the GAF annotation format ‎No edit summary current
12:0112:01, 25 October 2023 diff hist +14‎ m Proposed Developments to the GAF annotation format ‎No edit summary
03:4703:47, 25 October 2023 diff hist +339‎ m Projects update meeting 2023-10-25 ‎ →‎Release schedule
03:4403:44, 25 October 2023 diff hist 0‎ m Projects update meeting 2023-10-25 ‎ →‎Release schedule
03:4403:44, 25 October 2023 diff hist −9‎ m Projects update meeting 2023-10-25 ‎ →‎Release schedule
03:4403:44, 25 October 2023 diff hist +1,253‎ m Projects update meeting 2023-10-25 ‎No edit summary
03:2103:21, 25 October 2023 diff hist +114‎ m Projects update meeting 2023-10-25 ‎No edit summary

05:1905:19, 24 October 2023 diff hist +600‎ N Projects update meeting 2023-11-15 ‎ Created page with "= Attendees = * Members: David, Jim, Kimberly, Pascale, Seth, Suzi, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: =Debrief SAB meeting= Nov 7, 2023 * [https://docs.google.com/document/d/1vWp76TEN3bsqs9VlzzkQJeR6kSL2As-jN1ZILKK8aC0/edit Draft agenda] (based on 2020-10 agenda) * Presentation from [https://docs.google.com/presentation/d/1EBKv0Y_Ybqiddd3Hma9Iupn_kF-wgEeeh3ONBHoe1p4/edit#slide=id.g6098edfb95_0_0 Oct 2020] =Main points and AI from Fall 2023 GOC meet..."
05:1905:19, 24 October 2023 diff hist +35‎ m Project stand up meetings ‎No edit summary
05:1805:18, 24 October 2023 diff hist +604‎ N Projects update meeting 2023-11-01 ‎ Created page with "= Attendees = * Members: David, Jim, Kimberly, Pascale, Seth, Suzi, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: =Prepare for SAB meeting= Nov 7, 2023 * [https://docs.google.com/document/d/1vWp76TEN3bsqs9VlzzkQJeR6kSL2As-jN1ZILKK8aC0/edit Draft agenda] (based on 2020-10 agenda) * Presentation from [https://docs.google.com/presentation/d/1EBKv0Y_Ybqiddd3Hma9Iupn_kF-wgEeeh3ONBHoe1p4/edit#slide=id.g6098edfb95_0_0 Oct 2020] =Main points and AI from Fall 2023 GOC..."
05:1805:18, 24 October 2023 diff hist +134‎ m Projects update meeting 2023-10-25 ‎No edit summary

12:5912:59, 23 October 2023 diff hist +3,141‎ N Ontology meeting 2023-10-23 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Steven, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present:''' * '''Regrets:''' ==[https://github.com/geneontology/go-ontology/issues/25933 Cell to cell signaling terms]== Request was to * Replace "epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification GO:0060802, with epiblast cell-extraembryonic ectoderm cell signaling (Single EXP to PMID:14511481) * Replace "..."
05:2305:23, 23 October 2023 diff hist +275‎ m Projects update meeting 2023-10-25 ‎No edit summary

13:2313:23, 17 October 2023 diff hist +195‎ N Projects update meeting 2023-10-25 ‎ Created page with "= Attendees = * Members: David, Jim, Kimberly, Pascale, Seth, Suzi, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: =Prepare for SAB meeting= Nov 7, 2023 Category: GO Managers Meetings"
08:2708:27, 17 October 2023 diff hist +257‎ m Interpretation of Travis checks errors ‎No edit summary

13:0413:04, 16 October 2023 diff hist +72‎ m Ontology meeting 2023-10-16 ‎No edit summary current
13:0313:03, 16 October 2023 diff hist +73‎ m Ontology meeting 2023-10-16 ‎ →‎Design patterns
13:0013:00, 16 October 2023 diff hist +75‎ m Ontology meeting 2023-10-16 ‎No edit summary
12:5712:57, 16 October 2023 diff hist +229‎ m Ontology meeting 2023-10-16 ‎No edit summary
10:3810:38, 16 October 2023 diff hist +7‎ m Interpretation of Travis checks errors ‎ →‎Obsolete term should not have a superclass
10:3810:38, 16 October 2023 diff hist +1‎ m Interpretation of Travis checks errors ‎ →‎Obsolete term should not have a superclass
10:3710:37, 16 October 2023 diff hist −267‎ m Ontology meeting 2023-10-16 ‎ →‎Protégé 6.3.1
07:0407:04, 16 October 2023 diff hist +308‎ Ontology meeting 2023-10-16 ‎No edit summary
03:4003:40, 16 October 2023 diff hist +643‎ m Interpretation of Travis checks errors ‎No edit summary
02:3802:38, 16 October 2023 diff hist +217‎ m Interpretation of Travis checks errors ‎No edit summary
02:0902:09, 16 October 2023 diff hist +187‎ m Ontology meeting 2023-10-16 ‎No edit summary
02:0702:07, 16 October 2023 diff hist +282‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
02:0202:02, 16 October 2023 diff hist +29‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
02:0102:01, 16 October 2023 diff hist +6‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
02:0002:00, 16 October 2023 diff hist −1‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
02:0002:00, 16 October 2023 diff hist +2‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
01:5901:59, 16 October 2023 diff hist +1‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
01:5901:59, 16 October 2023 diff hist −2‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
01:5401:54, 16 October 2023 diff hist +1‎ m Interpretation of Travis checks errors ‎No edit summary
01:5401:54, 16 October 2023 diff hist +8‎ m Interpretation of Travis checks errors ‎No edit summary
01:5401:54, 16 October 2023 diff hist −10‎ m PAINT User Guide ‎ →‎Step 1: Find and "lock" families for curation Tag: Manual revert
01:5301:53, 16 October 2023 diff hist +10‎ m PAINT User Guide ‎ →‎Step 1: Find and "lock" families for curation Tag: Reverted
01:5001:50, 16 October 2023 diff hist +1‎ m Interpretation of Travis checks errors ‎No edit summary
01:5001:50, 16 October 2023 diff hist +12‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
01:4901:49, 16 October 2023 diff hist +36‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
01:4901:49, 16 October 2023 diff hist 0‎ N File:Catalytic activity.png ‎No edit summary current
01:4801:48, 16 October 2023 diff hist +32‎ m Interpretation of Travis checks errors ‎ →‎Term should not have a superclass
01:4801:48, 16 October 2023 diff hist 0‎ N File:Go reaction participants.png ‎No edit summary current
01:4601:46, 16 October 2023 diff hist +11‎ m Interpretation of Travis checks errors ‎No edit summary
01:4501:45, 16 October 2023 diff hist +1‎ m Interpretation of Travis checks errors ‎No edit summary
01:4301:43, 16 October 2023 diff hist +429‎ m Interpretation of Travis checks errors ‎No edit summary
01:3701:37, 16 October 2023 diff hist +237‎ N Interpretation of Travis checks errors ‎ Created page with " == Review Status == Last reviewed: In progress Reviewed by [http://wiki.geneontology.org/index.php/Ontology_Editing_Guide Back to: Ontology Editing Guide] Category:GO Editors Category:Ontology Category:Editor_Guide_2018"
01:3601:36, 16 October 2023 diff hist +106‎ m Ontology Editors Daily Workflow ‎ →‎Automated checks current
01:3501:35, 16 October 2023 diff hist +4‎ m Ontology editors' manual ‎ →‎Ontology Editors Daily Workflow
01:3401:34, 16 October 2023 diff hist +1‎ m Ontology Editors Daily Workflow ‎ →‎Review Status
01:3401:34, 16 October 2023 diff hist +46‎ m Ontology editors' manual ‎ →‎Ontology Editors Daily Workflow

02:5502:55, 13 October 2023 diff hist −1‎ m Located in ‎No edit summary
02:5502:55, 13 October 2023 diff hist +152‎ m Located in ‎ →‎What not to capture with the has_input relation
02:5302:53, 13 October 2023 diff hist +55‎ m Annotation Relations ‎ →‎Standard Annotation: Gene Product to Term (gp2term) Relations
02:5202:52, 13 October 2023 diff hist +393‎ m Located in ‎No edit summary

05:2105:21, 12 October 2023 diff hist −1‎ m Ontology meeting 2023-10-16 ‎No edit summary
05:2005:20, 12 October 2023 diff hist +3,457‎ N Ontology meeting 2023-10-16 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Val, Steven, Jim, Tanya, Kimberly, Peter, Chris, Paul * '''Present:''' * '''Regrets:''' =Discussion points= ==Switching from has in/output to has primary in/output== * '''TBC''' OK to merge, in the sense that the inferences are no worse than current and no equivalent terms are being created * Need decision on relation to use for [https://github.com/geneontology/go-ontology/issues/26217 receptor activity] ==[https://gith..."
04:2804:28, 12 October 2023 diff hist +170‎ m Ontology meeting 2023-10-09 ‎ →‎Enzymatic directional reactions current
04:2604:26, 12 October 2023 diff hist +242‎ m Ontology meeting 2023-10-09 ‎ →‎Cross references for obsolete terms
04:2504:25, 12 October 2023 diff hist +99‎ m Ontology meeting 2023-10-09 ‎No edit summary

04:0804:08, 9 October 2023 diff hist +568‎ m Ontology meeting 2023-10-09 ‎No edit summary
03:2503:25, 9 October 2023 diff hist +4,392‎ N Projects update meeting 2023-10-11 ‎ Created page with "= Attendees = * Members: David, Jim, Kimberly, Pascale, Seth, Suzi, Huaiyu, Paul, Chris, Cynthia * Present: * Regrets: =Announcements= * GOC meeting: October 17-19, 2023 ** Review and finalize agenda: [https://docs.google.com/document/d/18ipImQU4_NnJ2iiw88Gwa4BTargC4cPBteyHF2RFR_M/edit Draft agenda] ** ISB is having a 1.5h session on the 18th =Administrative points= * Is this call moving to every other week or the second and fourth weeks of the month? In the past..." current
03:2303:23, 9 October 2023 diff hist +8‎ m Project stand up meetings ‎ →‎Agenda and Minutes
02:4002:40, 9 October 2023 diff hist +9‎ m Ontology meeting 2023-10-09 ‎ →‎Switching from has in/output to has primary in/output

08:1408:14, 5 October 2023 diff hist +170‎ m Ontology meeting 2023-10-09 ‎ →‎Discussion points
07:4507:45, 5 October 2023 diff hist +99‎ m Ontology meeting 2023-10-09 ‎ →‎Discussion points
07:1907:19, 5 October 2023 diff hist +816‎ m Ontology meeting 2023-10-09 ‎ →‎Switching from has output to has primary output
07:1407:14, 5 October 2023 diff hist +50‎ m Ontology meeting 2023-10-09 ‎ →‎Discussion points
06:5806:58, 5 October 2023 diff hist +421‎ m Ontology meeting 2023-10-09 ‎ →‎Switching from has input to has primary input

08:0408:04, 4 October 2023 diff hist +158‎ m Ontology meeting 2023-10-09 ‎No edit summary

08:5808:58, 3 October 2023 diff hist −1‎ m Ontology meeting 2023-10-09 ‎No edit summary
02:3702:37, 3 October 2023 diff hist +424‎ m Ontology meeting 2023-10-09 ‎No edit summary

13:2713:27, 27 September 2023 diff hist +73‎ m Projects update meeting 2023-09-27 ‎No edit summary current
11:5111:51, 27 September 2023 diff hist +44‎ m Projects update meeting 2023-09-27 ‎ →‎Recently closed projects

09:3609:36, 26 September 2023 diff hist 0‎ m Guide to GO Evidence Codes ‎ →‎Author Statements current
09:3609:36, 26 September 2023 diff hist 0‎ m Guide to GO Evidence Codes ‎ →‎Author Statements
03:1303:13, 26 September 2023 diff hist +67‎ m Projects update meeting 2023-09-27 ‎ →‎Active projects
03:1203:12, 26 September 2023 diff hist +188‎ m Projects update meeting 2023-09-27 ‎No edit summary
03:0403:04, 26 September 2023 diff hist +1‎ m Ontology meeting 2023-10-09 ‎No edit summary
03:0303:03, 26 September 2023 diff hist +2,640‎ m Ontology meeting 2023-10-09 ‎No edit summary
03:0303:03, 26 September 2023 diff hist +508‎ N Ontology meeting 2023-10-02 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Jim, Tanya, Kimberly, Peter, David, Chris, Paul * '''Present:''' * '''Regrets:''' =Discussion points= ==Usage of 'has input' versus 'has primary input'== * [https://github.com/geneontology/go-ontology/issues/26169 Ticket to test changing all 'has input' to 'has primary input'] * Table of ‘pros and cons’ for the two options, see: https://docs.google.com/spreadsheets/d/1tYXUa8RhnihwOVCokpgvARobZ9CmCHCvWrVWdjXRSC4/e..." current
03:0303:03, 26 September 2023 diff hist 0‎ m Ontology editors' conference call minutes 2023 ‎No edit summary
03:0103:01, 26 September 2023 diff hist +508‎ N Ontology meeting 2023-10-09 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Jim, Tanya, Kimberly, Peter, David, Chris, Paul * '''Present:''' * '''Regrets:''' =Discussion points= ==Usage of 'has input' versus 'has primary input'== * [https://github.com/geneontology/go-ontology/issues/26169 Ticket to test changing all 'has input' to 'has primary input'] * Table of ‘pros and cons’ for the two options, see: https://docs.google.com/spreadsheets/d/1tYXUa8RhnihwOVCokpgvARobZ9CmCHCvWrVWdjXRSC4/e..."
03:0003:00, 26 September 2023 diff hist +3‎ m Ontology editors' conference call minutes 2023 ‎No edit summary
02:5902:59, 26 September 2023 diff hist +43‎ m Ontology editors' conference call minutes 2023 ‎No edit summary

12:0712:07, 25 September 2023 diff hist +2‎ m Ontology meeting 2023-09-25 ‎No edit summary current
12:0112:01, 25 September 2023 diff hist +42‎ m Ontology meeting 2023-09-25 ‎No edit summary
12:0012:00, 25 September 2023 diff hist +29‎ m Ontology meeting 2023-09-25 ‎No edit summary

02:4402:44, 21 September 2023 diff hist +17‎ m Projects update meeting 2023-09-27 ‎ →‎Active projects
02:4202:42, 21 September 2023 diff hist +2,493‎ N Projects update meeting 2023-09-27 ‎ Created page with "= Attendees = * Members: David, Jim, Kimberly, Pascale, Seth, Suzi, Huaiyu, Paul, Chris, Cynthia * Present: =Announcements= * GOC meeting: October 17-19, 2023 ** [https://docs.google.com/document/d/18ipImQU4_NnJ2iiw88Gwa4BTargC4cPBteyHF2RFR_M/edit Draft agenda] ** ISB is having a 1.5h session on the 18th * SAB meeting: November 7th, 2023 * Next week is the no GO calls week = Feedback request = == Proposal: need more information in GPI == Starting proposal to add t..."
02:4102:41, 21 September 2023 diff hist −41‎ m Project stand up meetings ‎No edit summary

08:5908:59, 20 September 2023 diff hist +316‎ m Ontology meeting 2023-09-25 ‎ →‎Cell to cell signaling terms
08:5008:50, 20 September 2023 diff hist +10‎ m Ontology meeting 2023-09-25 ‎ →‎Cell to cell signaling terms
08:4608:46, 20 September 2023 diff hist +952‎ m Ontology meeting 2023-09-25 ‎ →‎Cell to cell signaling terms
08:3508:35, 20 September 2023 diff hist +2,304‎ N Ontology meeting 2023-09-25 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Jim, Tanya, Kimberly, Peter, David, Chris, Paul * '''Present:''' * '''Regrets:''' =Discussion points= ==Usage of 'has input' versus 'has primary input'== We wanted to decide whether to switch in the ontology all ‘has input’ for ‘has primary input’ (as appropriate). I have made a table of ‘pros and cons’ for the two options, see: https://docs.google.com/spreadsheets/d/1tYXUa8RhnihwOVCokpgvARobZ9CmCHCvWrV..."

10:4210:42, 19 September 2023 diff hist +119‎ m Annotation Conf. Call 2023-09-19 ‎ →‎Methyltransferase MF terms

12:0312:03, 18 September 2023 diff hist +6‎ m Ontology meeting 2023-09-18 ‎No edit summary current
12:0212:02, 18 September 2023 diff hist +15‎ m Ontology meeting 2023-09-18 ‎No edit summary
12:0112:01, 18 September 2023 diff hist +17‎ m Ontology meeting 2023-09-18 ‎No edit summary
12:0112:01, 18 September 2023 diff hist +43‎ m Ontology meeting 2023-09-18 ‎No edit summary
10:3210:32, 18 September 2023 diff hist −115‎ m Ontology meeting 2023-09-18 ‎ →‎Other tickets
10:3210:32, 18 September 2023 diff hist −163‎ m Ontology meeting 2023-09-18 ‎No edit summary
10:2910:29, 18 September 2023 diff hist −1‎ m Ontology editors' conference call minutes 2023 ‎No edit summary
07:5807:58, 18 September 2023 diff hist −13‎ m Ontology editors' conference call minutes 2023 ‎No edit summary
07:5607:56, 18 September 2023 diff hist +5,364‎ N Ontology meeting 2023-09-18 ‎ Created page with "* '''Group members:''' Pascale, Raymond, Edith, Jim, Tanya, Kimberly, Peter, David, Chris, Paul * '''Present:''' * '''Regrets:''' =Precompute inferred taxon constraints and add to ontology release= See https://github.com/geneontology/go-ontology/issues/19759 =[https://github.com/geneontology/go-ontology/issues/21211 Odd parent - child relationships for binding MF terms]= Edith =Has_part guidelines= =Protein complex guidelines= * Protein_complexes * Versi..."

12:0712:07, 13 September 2023 diff hist +7‎ m Projects update meeting 2023-09-13 ‎ →‎Active projects current
11:0711:07, 13 September 2023 diff hist −1‎ m Projects update meeting 2023-09-13 ‎ →‎Announcements
11:0711:07, 13 September 2023 diff hist +105‎ m Projects update meeting 2023-09-13 ‎ →‎Announcements
11:0511:05, 13 September 2023 diff hist +1‎ m Projects update meeting 2023-09-13 ‎ →‎Attendees
11:0411:04, 13 September 2023 diff hist +5‎ m Projects update meeting 2023-09-13 ‎ →‎Announcements
11:0411:04, 13 September 2023 diff hist +40‎ m Projects update meeting 2023-09-13 ‎ →‎Announcements
11:0311:03, 13 September 2023 diff hist +27‎ m Projects update meeting 2023-09-13 ‎ →‎Attendees
11:0211:02, 13 September 2023 diff hist +14‎ m Projects update meeting 2023-09-13 ‎ →‎Attendees
11:0111:01, 13 September 2023 diff hist +31‎ m Projects update meeting 2023-09-13 ‎ →‎Attendees
05:1605:16, 13 September 2023 diff hist +119‎ m Guidelines for GO textual definitions ‎ →‎Cross-references for definitions
05:1405:14, 13 September 2023 diff hist +102‎ m Guidelines for GO textual definitions ‎ →‎Cross-references for definitions
05:1305:13, 13 September 2023 diff hist −17‎ m Guidelines for GO textual definitions ‎ →‎Cross-references for definitions
05:1005:10, 13 September 2023 diff hist +359‎ m Guidelines for GO textual definitions ‎ →‎Redefining terms
05:0605:06, 13 September 2023 diff hist +85‎ m Guidelines for GO textual definitions ‎No edit summary
05:0405:04, 13 September 2023 diff hist −2‎ m Guidelines for GO textual definitions ‎ →‎Use genus-differentia patterns for definitions
05:0405:04, 13 September 2023 diff hist +6‎ m Guidelines for GO textual definitions ‎ →‎Standard definitions for specific terms
05:0405:04, 13 September 2023 diff hist +3‎ m Guidelines for GO textual definitions ‎ →‎Standard definitions for specific terms
05:0405:04, 13 September 2023 diff hist +113‎ m Guidelines for GO textual definitions ‎ →‎Standard definitions for specific terms
05:0305:03, 13 September 2023 diff hist +17‎ m Cellular component processes ‎No edit summary current
05:0105:01, 13 September 2023 diff hist +203‎ m Guidelines for GO textual definitions ‎ →‎Standard definitions for specific terms
04:5904:59, 13 September 2023 diff hist −62‎ m Metabolic process ‎No edit summary current
04:5804:58, 13 September 2023 diff hist +263‎ m Guidelines for GO textual definitions ‎ →‎Transporter terms standard definitions
04:5504:55, 13 September 2023 diff hist 0‎ m Guidelines for GO textual definitions ‎ →‎Standard definitions for specific terms
04:5504:55, 13 September 2023 diff hist −35‎ m Guidelines for GO textual definitions ‎ →‎http://wiki.geneontology.org/index.php/Transporter_terms_standard_definitions
04:5404:54, 13 September 2023 diff hist +85‎ m Guidelines for GO textual definitions ‎ →‎Standard definitions for specific terms
04:5404:54, 13 September 2023 diff hist −1,001‎ m Guidelines for GO textual definitions ‎No edit summary
04:5204:52, 13 September 2023 diff hist +6‎ m Guidelines for GO textual definitions ‎ →‎Design patterns
03:3803:38, 13 September 2023 diff hist −29‎ m XP:cellular component xp protein ‎No edit summary current Tag: Manual revert
03:3703:37, 13 September 2023 diff hist +12‎ m Annotation guidelines for annotating complexes as annotation objects ‎No edit summary current
03:3603:36, 13 September 2023 diff hist +4‎ m Protein Complexes: who, what, where ‎No edit summary current
03:3503:35, 13 September 2023 diff hist +13‎ m GAF 2.1 specs ‎No edit summary current
03:3403:34, 13 September 2023 diff hist +13‎ m GAF file 2.0 survey (Retired) ‎No edit summary current
03:3403:34, 13 September 2023 diff hist +13‎ m Gene Product Association Data (GPAD) Format (Archived) ‎No edit summary current
03:3403:34, 13 September 2023 diff hist +13‎ m Gene Product Data File Format (Archived) ‎No edit summary current
03:3203:32, 13 September 2023 diff hist +122‎ N Category:Archived file formats ‎ Created page with "This category groups pages discussion retired file formats. Current documentation is on GitHub and on the main GO website." current

User contributions for Pascale

22 April 2024

21 April 2024

19 April 2024

12 April 2024

11 April 2024

10 April 2024

9 April 2024

8 April 2024

27 March 2024

26 March 2024

25 March 2024

20 March 2024

19 March 2024

18 March 2024

15 March 2024

13 March 2024

12 March 2024

11 March 2024

28 February 2024

26 February 2024

23 February 2024

20 February 2024

14 February 2024

13 February 2024

12 February 2024

8 February 2024

7 February 2024

6 February 2024

31 January 2024

30 January 2024

29 January 2024

24 January 2024

23 January 2024

22 January 2024

18 January 2024

17 January 2024

11 January 2024

10 January 2024

9 January 2024

8 January 2024

21 December 2023

18 December 2023

12 December 2023

11 December 2023

7 December 2023

5 December 2023

1 December 2023

30 November 2023

29 November 2023

27 November 2023

24 November 2023

22 November 2023

20 November 2023

17 November 2023

15 November 2023

13 November 2023

2 November 2023

31 October 2023

30 October 2023

26 October 2023

25 October 2023

24 October 2023

23 October 2023

17 October 2023

16 October 2023

13 October 2023

12 October 2023

9 October 2023

5 October 2023

4 October 2023

3 October 2023

27 September 2023

26 September 2023

25 September 2023

21 September 2023

20 September 2023

19 September 2023

18 September 2023

13 September 2023